Gene Cpin_1520 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1520 
Symbol 
ID8357661 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1865946 
End bp1866425 
Gene Length480 bp 
Protein Length159 aa 
Translation table11 
GC content44% 
IMG OID644963700 
Producthypothetical protein 
Protein accessionYP_003121218 
Protein GI256420565 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAGGT TCATTTTATT GGTGCTAGAT TTTTTTTACC AGCCGTTTGC GAAGCTAATG 
CCGCTGCAGA CCTTCCGTTA CCTCGCCTGT GGCAGTGGTA ATACGGCTAT GGATATCCTA
TTGTATTACG TCAGTTTTCA CTTTATACTG CACGAAACCC CGGTACAATT CAGCATCTTC
ACCATCAGTG CGCACATTGC CGCATTGTTT ATGGCGATGA TCGTGACATT CCCGACAGGG
TTCCTGTTGA GCAAGTTTAT CGTATTCTCA GAATCCAACC TGAGAGGACG TGTACAACTG
GTAAGGTATT TCATGCTGGT AGGCATCTGC ATCTGTCTGA ACTACGGTTT CATGAAGTTG
TTCGTAGAGT ATTTTCATAT CTACCCGACC ATTTCTAAAG TACTGACAAC CATATTCGTA
GTGGGATTCA GTTACCTGAC ACAGAAGAAA TTCACCTTCA AGGTCAAGGC AAGCGCCTGA
 
Protein sequence
MKRFILLVLD FFYQPFAKLM PLQTFRYLAC GSGNTAMDIL LYYVSFHFIL HETPVQFSIF 
TISAHIAALF MAMIVTFPTG FLLSKFIVFS ESNLRGRVQL VRYFMLVGIC ICLNYGFMKL
FVEYFHIYPT ISKVLTTIFV VGFSYLTQKK FTFKVKASA