Gene Cpin_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1517 
Symbol 
ID8357658 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1863054 
End bp1863626 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content46% 
IMG OID644963697 
ProductThymidine kinase 
Protein accessionYP_003121215 
Protein GI256420562 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1435] Thymidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTATTG AACCTTCTCT TGCGGGAGGG CGAAGGGGTT GGATAGAAGT GATCTGCGGC 
TCAATGTTTT CCGGAAAAAC GGAGGAATTG ATCAGAAGAT TGAAACGGGC CCGGATAGCC
AATTTGAAAG TGGAAATCTT TAAACCGATG ATAGATACAC GATATGATGT ACAACATATT
GTGTCTCACG ATGAAAGTCG TATCATCAGC ACGCCGCTGG AAAATTCACA GCAGATCCTG
CTGCTCGCGC AGGAAGTAGA TGTTGTGGGG ATTGATGAAG CGCAGTTTTT TGATGGAGAA
TTGCCTGAAG TATGCGATCA ACTGGCCCTG AGAGGGATCA GGGTGATCGT TGCCGGTTTG
GATATGGATT TTTTGGGTAA ACCATTCGGA CAAATGCCCT TCCTGCTGGC CAAAGCCGAC
TATATTACCA AACTACACGC GATATGTGTG AAATGCGGCA ATATCGCCAA CTACTCTTAC
CGCAAAAGTA AAGACAGTCA TACCGTGTTA TTGGGAGAAA CAGATCTCTA CGAACCACGA
TGCCGGCACT GTTATTACGA AGGTGTTGAA TAA
 
Protein sequence
MFIEPSLAGG RRGWIEVICG SMFSGKTEEL IRRLKRARIA NLKVEIFKPM IDTRYDVQHI 
VSHDESRIIS TPLENSQQIL LLAQEVDVVG IDEAQFFDGE LPEVCDQLAL RGIRVIVAGL
DMDFLGKPFG QMPFLLAKAD YITKLHAICV KCGNIANYSY RKSKDSHTVL LGETDLYEPR
CRHCYYEGVE