| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1494 |
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| Symbol | |
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| ID | 8357635 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1835420 |
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| End bp | 1838515 |
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| Gene Length | 3096 bp |
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| Protein Length | 1031 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 644963674 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121192 |
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| Protein GI | 256420539 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.248152 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGAACTA ATGGTACAAA AACAGCGGGC ATATTGCTGT TGTTGTCACT GGCAGTGGGT
ATCACCGCCT CCGCACAGCA ATCGCCTGCA CCAGGAAGCA GCGCTGTCCC CAACAGCATG
GCAGAACAGG AAGGCCCCGT GAAAGGAACA GTGAAAGACA ACAATGGCGT AGGCCTTATC
GGCGTGACCA TCCGTGTAAA AGGTACTTCG ACAGGTACCA CCTCGGGAGC GGATGGCACC
TTTACTATCA ACCTTCCCGC AGGAAAAGAT ACCCTCGTAT TTTCTTATCT CGGTTATGTC
AGCCAGGAAG TAAAGGCCGG CGCTGCACCG CTCAATATCA TACTCAGGAC TTCCGAAAGC
CAGCTGGAAC AGGTCGTAGT CGTAGGTTAT GGTACCCAGC GTAAGAAAGA CCTGACCGGG
TCGATCGCTT CTGTCAAAGG GGAAGACCTG CTTACCCAAC CCGTACAGAC GCCCACACAG
GCAGCCCAGG GCCGTATAGC CGGGGTGCAG GTAATCTCCT CCGGACAACC CAATTCCCAG
CCCCAGATCA GGGTACGTGG TACCGGTTCC GTACTGGCAG GCGCCAACCC GCTTTATGTA
GTAGATGGAG TACTTACGGA CGATATCCGG AATATCGCTA CCGCAGACAT CCTCACCATG
GACGTGCTGA AAGACGCTTC CGCCGCTATC TATGGGGTAC GTGCTGCCAA TGGTGTCATT
ATCATCACCA CGCGCAAGGG AAAGGCAGGT ACGCCACAGG TAAGATATGA CGCTAACGTG
GGCTTCAGGG AAGCTGCCAG CCTCGTAGAG ATGGCCAGTC GCGACCAGTA CATCTCTTAC
CTCACAGATG CAGCGCCTGG TAAAGATCCT GTTAATAACC CATATGTATA CAACGGTAGG
ACCAACTGGT ACAATGAAGT GCTCCGGAAA GCTTTTCAGA TGAACCATAA TATCTCCGTA
TCCGGTGGGT CTGAAAAAAG CACCTATTAC CTGAGTGCGG GATATATCCA GGAAGATGGT
ATCATCCAGA CCAACAATTT CAAGCGTTTC ACCTTCAGGG CCAATAATGA CGTCAATATC
ACGGATCAGC TGAAGTTTAC TTCCATGATC TCATATTCCC GTGCTATCTC CCGGGATGTG
GAACTCGGAG ATACTTACCG CAATATCTAC AGGGCAGCGC CCATTGTTAA GGCGCTTGAA
AATGGCCGTT ATGGTAATAC CTCCGGATGG GCCAACGTGG GTAACCCGCT CCTGGCTATC
AACAAGAGAA ATGATGGTCG CGGGGAAAGC CGTCTGCAGG GAAACGTAGC CCTGGAATAT
TCCCCGGTGT CTTCCCTGAA ACTGCGTTCC GGTTTTAACG CCGATCTCAA ATTCGGGAAT
GACCGGATCT ACGCCTACCG CTTCCTCAAT GACGACGCCA CCTTCCTGGT AGCCGGTGGT
AACCAACAAA ACCAGAACAG CCGCCTCACC CGCGAAGAAT ACCGTTCACA GGGCTGGATC
TGGGATAACA CGATCACATT TGATAAAACA TTCGATAAAC ACTCCCTCAC ATTACTGGCC
GGTTCGGTAA CGGAAGGTTT CTACAGTACC TCCCTCAAAG GGGTACGTAT CAATGTGCCG
GAAGCAGAAG ACCTCTGGTA CCTGGATCTG GGCGATCCCA ATGTACAATC CACGATTGCT
AACGTCGGTG ATAAATATGC CCGTCAGTCA TTTGTAGGTC GCGTGAACTA CGGATATGAC
GGCCGCTACC TGTTAAGTGC CTCCATTCGT GCTGACGGTA GTTCTAAATT CAGCGAACGC
TGGGGCTATT TCCCGACCGT CGGACTGGGT TGGGTATTGT CAGAAGAAAG TTTCCTGAAA
GACAAAGGCG TCTTTGACTT CCTGAAACTG CGTGGTAGCT GGGGTAAACT GGGTAATGAC
AACATTCCTA CCAATGCCTA TATCGCGGTG ACCAGCGTTG ATGCACCCTA CGTCTTTGAC
GGTACGGTCA GTTTGGGGGG TGCCCTGAAA GAAGTGAAAG ACCCTTTCCT GAAATGGGAA
GCCACTACAC AGTATGATGT CGGTTTTGAA TTTGCCTTGC TGAAAAGCAG ATTGAGTGGT
GAGATCGATT ATTACAATAA AAAAACCACA GATGCACTGG TGGTAGTGAA TACCCCCGCC
ATTCTCGGTG ACCAGGATAA TTCCTACATC ACCAATGCAG CATCTTTCAA AAACCAGGGC
TGGGAAATAT CCCTGAACTG GAAAGATGAT ATCACCGATG ACCTGAGTTA TACTATTGGC
GGTAATGTCA CTTTCAATAA AAATGAACTG ACAGGTCTTA ACGGCGGACA GGCATTACAG
GGTGGTAATG TCGGTCAACA GAGCTTTGTA ACCCGTACAG ACAACGGACA TCCTGTTGGT
AGTTTCTATG TAAGAGATGC CATCGGCATT TTCCAGAACC AGGCTGAAAT TGATAATTAT
AAAGGCCCTT CAGGGAATGC GATCCAGCCA GGTGCTGCTC CCGGTGATCT TAAATACCGC
GACGTAGACG GCGACGGTGA TATTGATGAT AATGACAAGA TCTATGCAGG TTCTTTCCAG
CCTAAATGCT TCTTTGGCTT TAACCTGGGA CTGAATTACA AAGGGCTTGA TCTCAGCGCC
AATTTCTATG GCAACGCCGG TAACAAGATC TATAATGGTA AGAAGGCGTT CCGTTTTGAT
CCTGCGGATA ATATAGAAGC TGATTATGCG AGCAAACGCT GGACAAGCAC CAACGCTTCT
ACGACAGATC CGCGGCTGAT CACATCTGGT ACGCCTGCCT CCACTTATTT CGTAGAATCA
GGCACTTATG TGCGTCTCAA TAACCTTATG CTCGGATACA CCTTCTCATC CAAAACAATG
AAGCTGATCG GTATCAACAG CTTCCGCATT TACGCTACTT CGCAGAACCT GTTTACGCTG
AAGAAATTCA GTGGTTTCAG TCCGGAGTTG CCTGGTGGTA CGATTGATGA CGCCAATGCG
ACCAACAACA AAAGCGGTAT CCTGGATGCC GGTATAGAAC TGAGTGCGTA TCCAACTACC
CGCACGTTTG CACTGGGTGT CAATGTCTCA TTTTAA
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| Protein sequence | MRTNGTKTAG ILLLLSLAVG ITASAQQSPA PGSSAVPNSM AEQEGPVKGT VKDNNGVGLI
GVTIRVKGTS TGTTSGADGT FTINLPAGKD TLVFSYLGYV SQEVKAGAAP LNIILRTSES
QLEQVVVVGY GTQRKKDLTG SIASVKGEDL LTQPVQTPTQ AAQGRIAGVQ VISSGQPNSQ
PQIRVRGTGS VLAGANPLYV VDGVLTDDIR NIATADILTM DVLKDASAAI YGVRAANGVI
IITTRKGKAG TPQVRYDANV GFREAASLVE MASRDQYISY LTDAAPGKDP VNNPYVYNGR
TNWYNEVLRK AFQMNHNISV SGGSEKSTYY LSAGYIQEDG IIQTNNFKRF TFRANNDVNI
TDQLKFTSMI SYSRAISRDV ELGDTYRNIY RAAPIVKALE NGRYGNTSGW ANVGNPLLAI
NKRNDGRGES RLQGNVALEY SPVSSLKLRS GFNADLKFGN DRIYAYRFLN DDATFLVAGG
NQQNQNSRLT REEYRSQGWI WDNTITFDKT FDKHSLTLLA GSVTEGFYST SLKGVRINVP
EAEDLWYLDL GDPNVQSTIA NVGDKYARQS FVGRVNYGYD GRYLLSASIR ADGSSKFSER
WGYFPTVGLG WVLSEESFLK DKGVFDFLKL RGSWGKLGND NIPTNAYIAV TSVDAPYVFD
GTVSLGGALK EVKDPFLKWE ATTQYDVGFE FALLKSRLSG EIDYYNKKTT DALVVVNTPA
ILGDQDNSYI TNAASFKNQG WEISLNWKDD ITDDLSYTIG GNVTFNKNEL TGLNGGQALQ
GGNVGQQSFV TRTDNGHPVG SFYVRDAIGI FQNQAEIDNY KGPSGNAIQP GAAPGDLKYR
DVDGDGDIDD NDKIYAGSFQ PKCFFGFNLG LNYKGLDLSA NFYGNAGNKI YNGKKAFRFD
PADNIEADYA SKRWTSTNAS TTDPRLITSG TPASTYFVES GTYVRLNNLM LGYTFSSKTM
KLIGINSFRI YATSQNLFTL KKFSGFSPEL PGGTIDDANA TNNKSGILDA GIELSAYPTT
RTFALGVNVS F
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