Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1484 |
Symbol | |
ID | 8357625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1819440 |
End bp | 1822253 |
Gene Length | 2814 bp |
Protein Length | 937 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963664 |
Product | hypothetical protein |
Protein accession | YP_003121182 |
Protein GI | 256420529 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0188972 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.663437 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGCCC GCTTGCTGAA ATTCAGTCTA CTCTTTCTAC TTCACCTATG CATTGTATTT CAACTATTTG CACAGGACCG TCTGCGCATT GACAGTATCA GTATCCTGTA TGCAGATACT AGCGGTAACG CTTCGCCCTA TTTCCTGGTC AGATTCAACC ATTTTCCGGG GAATGAAGTG CTGTCCAGAC ATGGACTCGT CCGCTCATTA AGCAGTGAAC ACCACATCCT GCAGGATGTC CGATTTGATA CTGCGGAGGC GAAAAAAGTC GTCTCTGTCA ATAAAGCAAA TTATAACTGG AAATGTAGTG ATCAGCTGGT ACAGGAACTG AGTAAAACCG CACTGAAGGA TAGCATACGC GTACAGGTAT CTTATACACA GGATATCCGG CAGTTACGCT ATTGCCGTCC TTTTAGTATT GCAACGGATT ACCGGGTAGC ATTAGCGGTC GTACAAAAGA AAGCGTGGGC ATTGTTTACC GCACAGGAAC AGGTGCGTTT TGCGGACAGA TTACGTACAC CACATACAGA GGTGATTATC AATAACGCAT TACCCTCCAT TGACTTTATA AACGCATTAC AGCAGCAATA TCCCACTTTG CAGGGAGCGC ATCATATAGT GGGCATCAAG GAAGAACTGT TTGACACAAC AGATATCGAC CTGCTGGGGA AATCGGTTCC TTCTCCCCTG GCGGCTAATA CCCTGAATCC ACATGCGACC ATGATGGCCA CCCTGATCGC AGGAACCGGT AATTCAGGAC TAAGAGGAAA AGGCGTAGCG ATCAAAGCAA GGCTTAGTTC CTCTGACTAC CTGCGCCTCC TGCCCGATCC TAATGACTAC TTCAAAAATG CAGGTATCAG TCTGCAAAAT CACTCCTATG GTACCACCAT CGAAAATCAA TATGCCGCAG AAGCAGTCGC CTATGACGCG CAGATTTTTA CACTGGACAC ACTCTTACAT GTCTTTTCTT CCGGTAATAT CGGCAATACG GCGCCACAGG AAGGATTGTA TAAGGGGCTA ACAGGATATG CTAATCTGAG TGGCACTTTT AAACAATCCA AGAATGTACT CATAGCAGGT GGCGTAGATA CCAATTACTT TGTACCCGCA CTGAGTTCCA AAGGACCTGC TTTTGACGGC CGTGTTGCGC CACAGGTGGT TGCTTTCGGA CAAGCAGGTA CTTCTGATGC AGCTGCAACG ACCACGGGTA TTGCCACGCT GGTACAGGAA GCTTATATGC AGACATATGG TAGCCGACCA TCCGCAGCCA TGGTGAAAGC AATATTGATC AATAGTGCAG ACGATACCGG TACACCCGGC CCCGATTATA GCAGTGGTTT TGGCATCCTG AATGCACTGG CCGCTGTGGA AACCATAAAA GACAAGCATG TAATCAGCGG TGTAGTTGCT GCGGATAATA CCGCCAGCTT CACTTTGACT ATTCCGGCAA ACACAGCCCG TTTAAAAGCG ACACTCGTCT GGAATGATCC CCCCGCTTCC GAACTGGCTG TAAAAGCATT GCTCAATGAC CTGGATGTTT CTTTTGTAGA AGAAACCGGA AAGCAACATC TCCCCTGGGT ATTAAGTACT TATCCACATG CAGATTCCCT AAAGAAACCT GCCTATAAAG GACGGGATAC GCTGAATAAC ATTGAACAGA TCACCATCGA TATGCCTGCA GCAGGTAAAG GGCGATTGAT CGTACGCGCC AATCAATTAC GCGCGGGTAA TACACAACGT TTCTCGCTGG CATATCAGTT TGTACCGGTA TCTTCCTTTG AATGGCAATA TCCGGCAGCA GGGGAACAAC TCACTTCAGG CACCAATATT TCCGTTCGCT GGCGCACCCT GCATCCTGGA AACGGGACGC TGGCTTACAG TATCGATAGT GGCGCTACCT GGCTTACCAT CGCTGCCAAT CTTCCTTTAT CAGCAGGCAA TACGCGCTGG AATATACCCG CTGTATTCAG TCAGGGTTTA TTGCGCATCA CCACTGCCGA TACCAGCTGG ATCAGTCCTC CTTTCAACAT ATCGCCACCT GTCGCCATCA ATATCGGTTT TAACTGTCCG GATACCTTGC TGGTCTACTG GCGGGGCGTA CAAAATGCCC GCGCTTATGA CGTGCAGACC GTGACAGGAC AAACCCTCTC CCGGCTGACA CTCACCAGTG ATACTATACT CTCTATCCCT AAAACCCAAT TACATGCTCC CTTTATTACC ATACGCCCCG TGCATAAAGA CGGATGGACC GGTATGCAGA GCAGTACCTA CAACTATGAG CAACAGGGCG TCAGTTGTTT CTTCCGGCAG GTACTGGCCG ATGTAATGGA AGATAACAGT GTTGATATTT CTGTAGTGCT GAGTAGTTTG CTGCGAATAA AGAAAGTCTA CTGGGAAAGG CTGCAGGGGA ATGATTTTGT CACCCTTTCT TCACAGGACA TTGGGTTGGA AGATACTTAC ATCTTTAAAG ACATCCCCGG GCGTTCCGGC ATCTTCTATT ACAGGGTTAA ACTGGAGCTG ACAGACGGAC GGATTATTTA CTCTGATATA CAATCGGTAC AACTGCTGAT TAACCAGGAT TTCCACCTCT TCCCGGTACC GGCAGGACAG GAATTGACAC TGATCAGCAA CAGACTGGGC GACTTCCGTC TACGGATTAC AGACATGACC GGACGGACCA TTTTTGCAGG GCCACTCACC AGTGTGCGAC AGACGTACTC CTTAAAAGGA ATAGCGCCCG GCGTATACCT GTGTGTGATA TACGAGGGCG CTCAGAAAAT ATTTGTGAAA CGCTTTATTA AAGCGGGAGA TTAA
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Protein sequence | MNARLLKFSL LFLLHLCIVF QLFAQDRLRI DSISILYADT SGNASPYFLV RFNHFPGNEV LSRHGLVRSL SSEHHILQDV RFDTAEAKKV VSVNKANYNW KCSDQLVQEL SKTALKDSIR VQVSYTQDIR QLRYCRPFSI ATDYRVALAV VQKKAWALFT AQEQVRFADR LRTPHTEVII NNALPSIDFI NALQQQYPTL QGAHHIVGIK EELFDTTDID LLGKSVPSPL AANTLNPHAT MMATLIAGTG NSGLRGKGVA IKARLSSSDY LRLLPDPNDY FKNAGISLQN HSYGTTIENQ YAAEAVAYDA QIFTLDTLLH VFSSGNIGNT APQEGLYKGL TGYANLSGTF KQSKNVLIAG GVDTNYFVPA LSSKGPAFDG RVAPQVVAFG QAGTSDAAAT TTGIATLVQE AYMQTYGSRP SAAMVKAILI NSADDTGTPG PDYSSGFGIL NALAAVETIK DKHVISGVVA ADNTASFTLT IPANTARLKA TLVWNDPPAS ELAVKALLND LDVSFVEETG KQHLPWVLST YPHADSLKKP AYKGRDTLNN IEQITIDMPA AGKGRLIVRA NQLRAGNTQR FSLAYQFVPV SSFEWQYPAA GEQLTSGTNI SVRWRTLHPG NGTLAYSIDS GATWLTIAAN LPLSAGNTRW NIPAVFSQGL LRITTADTSW ISPPFNISPP VAINIGFNCP DTLLVYWRGV QNARAYDVQT VTGQTLSRLT LTSDTILSIP KTQLHAPFIT IRPVHKDGWT GMQSSTYNYE QQGVSCFFRQ VLADVMEDNS VDISVVLSSL LRIKKVYWER LQGNDFVTLS SQDIGLEDTY IFKDIPGRSG IFYYRVKLEL TDGRIIYSDI QSVQLLINQD FHLFPVPAGQ ELTLISNRLG DFRLRITDMT GRTIFAGPLT SVRQTYSLKG IAPGVYLCVI YEGAQKIFVK RFIKAGD
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