Gene Cpin_1482 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1482 
Symbol 
ID8357623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1817030 
End bp1817755 
Gene Length726 bp 
Protein Length241 aa 
Translation table11 
GC content49% 
IMG OID644963662 
Product6-phosphogluconolactonase 
Protein accessionYP_003121180 
Protein GI256420527 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000109648 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.405401 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTAC ACATAGCAAA GAACACCCAG GAACTGAGTG AAAACCTGGC GGCCTGGATC 
AGCAATTACA TCCAGGAAGT ATTACAGGAC CAGCCCATCT TTACATGGGC GCTCTCCGGG
GGAAGTACGC CAAAGGCATT ATACACGCTG CTCACAAAAG AGCCTTATAA GTTGATCATT
CCATGGGAGA AAATTCACTT CTTCTGGGGC GACGAAAGGG CCGTACCTTT TGAAGATGAG
CGTAATAACG CCCGTATGGC TTACGAAACC CTGCTGGACG TAGTAGGCGT ACCTTCAGAA
AATATCCATG TTATGCGCAC GGATATCGAA CCGGAAGCCG CAGCAAAAGA ATATGAGTCT
ATCCTGAAGA AATACTTCGA AGACAGCGAT ACCACTTTTG ATCTCGTGCT CTTAGGTATG
GGCGACGACG GACATACCCT GTCCCTCTTC CCTGGTCTGC CGATCGTACA CGAAAAGAAA
GCATGGGTAA AAGCCTTCTT CCTGCAGGCA CAGGATATGT ACCGTATCAC ACTGACGGCT
CCTGTCGTAA ATGAAGCTGC CTGCGTGATA TTCATGGCTA CTGGTGCTGG TAAAGCCCTG
ACGTTGAAAA GTGTAATAGA AGGCGACTTC GAAGCTGAAA AATTCCCTTC CCAGCTGATC
CGTCCACAAG ATGGAGAACT GCACTGGTTT GTGGATGAAG CAGCTGCAGG TGCGCTGGAG
ATGTAA
 
Protein sequence
MELHIAKNTQ ELSENLAAWI SNYIQEVLQD QPIFTWALSG GSTPKALYTL LTKEPYKLII 
PWEKIHFFWG DERAVPFEDE RNNARMAYET LLDVVGVPSE NIHVMRTDIE PEAAAKEYES
ILKKYFEDSD TTFDLVLLGM GDDGHTLSLF PGLPIVHEKK AWVKAFFLQA QDMYRITLTA
PVVNEAACVI FMATGAGKAL TLKSVIEGDF EAEKFPSQLI RPQDGELHWF VDEAAAGALE
M