| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1468 |
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| Symbol | |
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| ID | 8357609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1800044 |
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| End bp | 1802092 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644963648 |
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| Product | TonB-dependent receptor |
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| Protein accession | YP_003121166 |
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| Protein GI | 256420513 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAAAC TGCTTCTGGC GCTTGGCATA TTCCCGCTGG CCACGTACGC ACAATCATAT
TCTGATACTA CGCATCGCCT GCGCGAAGTA GTGATTCAGG CATATCCTGG TAAACAGTTT
ACCCTGCTCC AGGTACCTAC CAGCAGTACC GTACTGACCT CCCGGCAGCT GGCATTACAA
CAGGGCGTTA CCCTGCTGCC TGCCATGAAT ACTGTTCCCG GCGTACGTAT GGAAGAACGT
TCTCCCGGCA GTTACCGCCT CTCTCTAAGA GGAAGCCTGT TGCGCTCTCC TTTTGGGATC
CGCAATGTAA AGATCTACCT GGATGAAATT CCCCTGACAG ATGCTGGTGG TAATTCTTAC
CTGAACCTCT CCGATCCGGG CAGCTTCCAG GGCATTGAAG TGTTAAAGGG ACCTGACGGC
AGCCAGTTTG GCGCTAACTC GGGTGGTGTG ATACTCCTGC ATCCTGCGGG TACCCTACCT
GACAGCAGCC GCTTACGTGC TGATATACAG GGGGGCAGTT ATGGCCTGTT CCGCGAACAG
GTAGGCTGGC AGCAGCAATG GGGTAATTAT AAACTGAATG TTTATCAGGC TGTACACCGT
TCCGACGGCT ATCGCGATAA CAGCGCCATG CAGCGGTATT ATATACAAAC CGCCCAGCAA
TGGCAATACA ACGCACATAA TCAACTGAAA CTGATTGCGT TTTACAGCGA CCTGGATTAT
CGTACCCCAG GCGGACTGAC AGAAGCACAG ATGAACGCCA ATCCGAAGGC TGCCCGTCCT
GCGACGCCAG CCTTACCTGG CGCTATTACC CAGAAAGCCG GTATCCGTAA TAAGACCGCT
TTCGGTGGAT TGGTACATAC CTCCCAGCTT GCTGAACACT GGCAACATGT TATTTCCGTG
TATGGTAGCA ATACACATTT CGAGAATCCC TTCATCACCA ATTATGAAGC AAGGGATGAG
AATACCGCCG GTGCACGTAC TTATATCGCT TTACAAGATC AGCCACTGGG CAACAGCGGG
ATGCGTCTCG ACTGGACCAC AGGTCTGGAA TGGCAACAAA CCACTTCAGA TATCGACAAC
TATGGCAACC GCGCAGGTGT AAGAGATACC CTGCAAGCTG CCAGCGATAT CACTGCCAGA
CAATACTTCT ACTTTACCGG TCTGACCCTG CGTCCCGGCA AACAATGGGT GGCAGAAGCG
GCTGTCAGTG TAAACTACTA TCGTTATCAC TTTAACGATG TAGCAGCTGG CGTAGATGGT
AAGAAGAAAT TCACGGCGGA ACTGATGCCC CGTTTCTCCC TGTCTTACCT GATCACACCA
GCGCTGGCTG CACGGGCGAC AGTAAGCAGG GGCTACTCCC CTCCTTCTAT TGCGGAGGTA
AGGGCTTCCG ATAATATCAT TAATACGGGT CTTCAGGCGG AAACTGGCTG GAACTACGAA
ACAGGCCTTC GCCTGAACTC CCGTAATAAC CGTTTCATGG CAGATGCAGC AGTCTTCTAC
TACAAATTAC AGGATGCAAT CGTACGTAAG CTCCATGATA ATGGCACAGA GTTCTTCACC
AATGCAGGTG GTACCAACCA GACAGGTGTA GAATTCCAGG GAAGTGCATG GTTACTGATG
CCTCGTCGCG AAGGCTTCCT CCGTGGCATA CAGTTACAGG AAAGTTTTAC TTACAGCCAC
TTCCGCTTCA GCAACTATAA CAGCGCCGGT AAGGACTTCT CCGGTAATGC CCTCACCGGT
GTACCGAAAA CAGTCGTAAC AGGCAGTTTG CTGATAGAAC TGCCTGCCAG GGTTTCCCTG
TATGGTCAAT ATAACTTCGT TGACCGCTTA CCGCTGGATG ACGCCAATAC TGCTTTTTCA
AAGGAATATC ACCTGGTACA GGCAAAGGTG AACTGGGAAG TGAATAAATG GCTGGCAGTA
TATGCCGGTG CGGACAACCT GCTGAACCAG CGTTATAACC TGGGGAATGA CCTGAATGCA
GTAGGTGCAC GCTATTACAA CCCTGCTCCT GACAGAAACT ATTATGGCGG TGTAAGGGTG
ACCTTATAA
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| Protein sequence | MKKLLLALGI FPLATYAQSY SDTTHRLREV VIQAYPGKQF TLLQVPTSST VLTSRQLALQ
QGVTLLPAMN TVPGVRMEER SPGSYRLSLR GSLLRSPFGI RNVKIYLDEI PLTDAGGNSY
LNLSDPGSFQ GIEVLKGPDG SQFGANSGGV ILLHPAGTLP DSSRLRADIQ GGSYGLFREQ
VGWQQQWGNY KLNVYQAVHR SDGYRDNSAM QRYYIQTAQQ WQYNAHNQLK LIAFYSDLDY
RTPGGLTEAQ MNANPKAARP ATPALPGAIT QKAGIRNKTA FGGLVHTSQL AEHWQHVISV
YGSNTHFENP FITNYEARDE NTAGARTYIA LQDQPLGNSG MRLDWTTGLE WQQTTSDIDN
YGNRAGVRDT LQAASDITAR QYFYFTGLTL RPGKQWVAEA AVSVNYYRYH FNDVAAGVDG
KKKFTAELMP RFSLSYLITP ALAARATVSR GYSPPSIAEV RASDNIINTG LQAETGWNYE
TGLRLNSRNN RFMADAAVFY YKLQDAIVRK LHDNGTEFFT NAGGTNQTGV EFQGSAWLLM
PRREGFLRGI QLQESFTYSH FRFSNYNSAG KDFSGNALTG VPKTVVTGSL LIELPARVSL
YGQYNFVDRL PLDDANTAFS KEYHLVQAKV NWEVNKWLAV YAGADNLLNQ RYNLGNDLNA
VGARYYNPAP DRNYYGGVRV TL
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