| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1467 |
|---|
| Symbol | |
|---|
| ID | 8357608 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1798717 |
|---|
| End bp | 1799787 |
|---|
| Gene Length | 1071 bp |
|---|
| Protein Length | 356 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 644963647 |
|---|
| Product | galactose-1-phosphate uridylyltransferase |
|---|
| Protein accession | YP_003121165 |
|---|
| Protein GI | 256420512 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1085] Galactose-1-phosphate uridylyltransferase |
|---|
| TIGRFAM ID | [TIGR00209] galactose-1-phosphate uridylyltransferase, family 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAA ATACCTTTGA TCTGACGGCA CATCCTCATA CCCGCTTAAA TATTCTCACC
GGAGAATGGG TACTGGTATC GCCACACCGT TCTAAACGTC CATGGCAGGG GAAAGTAGAA
GCTCCTGCAC TGGCACAACG TCCCGCCTAT GTGGAAGATT GTTATCTGTG TCCGGGCAAT
ACCCGCGCAG ATGGTACGAA AAACACACAA TACGATGGAC CGATCGCTTT CACCAATGAC
TTCTCCGCCC TGCTGGCCGA TACGCCAAAA GGAACGGTGG ATGAAGACGA ATTGCTGATC
GCACGTTCAC AGAAAGGCAT TTGCCGCGTG ATCTGTTTCA GTCCTCGTCA TGACCTGACC
TTACCGGAAA TGGAACTGCC GGATATCCGT AAAGTGGTAG ATCTCTGGCA TACAGAGCTG
GAATCGCTGA CTGCAGTACC ATTTATCAAA TACATACAGA TCTTCGAAAA TAAAGGGGAG
ATTATGGGTT GCAGTAATCC GCATCCGCAT GGTCAGATCT GGGCTTCCGA AGATGTGCCG
ATGGAACTTG AAAAAGAAAC CCGTCAGCAA CGCAAGTACT TCCAGCAACA CGGACGCAGC
CTGCTGACCG CTTACCTGGA AAAAGAACTG AAAGAGGGTG ACCGAATCAT CGCAGAAAAT
GAACATTTTG TTGCGCTGGT GCCTTTCTGG GCAGTATGGC CATATGAGGC GATGATCATC
AGCCGCCGTC ATGTACAAAG TCTGCTGCAG TTCACTCCTG CAGAACGTGA TGGACTGGCC
GCGATCCTGA AAGATCTCAC CACCCGTTAC GACAACCTGT TTGAAACATC ATTCCCATAT
TCAGCAGGTA TGCACCAGAT GCCTTTCAAT GATGGCGACA GTCATCCGGA ATGGCATTGG
CATATGCACT TCTATCCACC ATTACTGCGC TCGGCGACAG TGAAGAAATT CATGGTAGGA
TATGAAATGC TGGCACATCC ACAGAGAGAT ATTACGCCTG AATTTGCGGC CGCACGTCTC
AGGGAACTGC CAGTAGTGCA TTATAAGAAA CAAGCCGGTG TGCCTGCTTA A
|
|---|
| Protein sequence | MSENTFDLTA HPHTRLNILT GEWVLVSPHR SKRPWQGKVE APALAQRPAY VEDCYLCPGN
TRADGTKNTQ YDGPIAFTND FSALLADTPK GTVDEDELLI ARSQKGICRV ICFSPRHDLT
LPEMELPDIR KVVDLWHTEL ESLTAVPFIK YIQIFENKGE IMGCSNPHPH GQIWASEDVP
MELEKETRQQ RKYFQQHGRS LLTAYLEKEL KEGDRIIAEN EHFVALVPFW AVWPYEAMII
SRRHVQSLLQ FTPAERDGLA AILKDLTTRY DNLFETSFPY SAGMHQMPFN DGDSHPEWHW
HMHFYPPLLR SATVKKFMVG YEMLAHPQRD ITPEFAAARL RELPVVHYKK QAGVPA
|
|---|
| |