| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1462 |
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| Symbol | |
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| ID | 8357603 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1792864 |
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| End bp | 1793649 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 644963642 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003121160 |
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| Protein GI | 256420507 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACTAT CGTTAAAGGG GAAAACCGCC GTTATCTGTG GAAGCACTCA GGGAATAGGA
TTGGCTACAG CCGGTGAACT GGCTGCATTA GGCGCAGAAT GCATCCTCCT GGCAAGGAAT
AAAGAAAGTC TCAAGACCGC GGTCGCAGGA CTTGCCACGG ATCATTTGCA GGAGCATAGC
TATGTGGTGG CTGACTTCCG TGACACCCAA CAGGTGGAGC AGGCTATAAA AAGTATTACC
GAAAAGCAAA CGGTACATAT ACTTGTTAAC AATACCGGGG GGCCTAAAGC GGGCCCGGTA
ATGGAAGCCG ATATCCACGA ATTCACGGAT GCCTTTCAGC AACACCTCAT CATCAATCAT
ATACTTGTAC AGGCAGTCAT AGCCGGCATG ACAGCTGCCG GCTATGGCCG CATTATCAAT
ATTGTTTCAA CATCTGTGAA GGCGCCGCTG AAGAATCTCG GCGTATCCAA CACGATCCGT
GGGGGCGTCG CTTCCTGGGC CAAAACCATG GCCGGAGAAT TAGCCCCTTA TGGAATCACG
GTGAACAACG TATTGCCGGG CATGACCAAC ACCGCACGCC TGCAGTCCAT GCTGGAGTAT
AACGCCAGCA AGCGTAATAC GACGCTTAAC AATATAGAGG AAGAGTATCT GAAAGAGATC
CCCATGAAAC GTTTTGGCGA CCCTAAAGAA ATTGCTGCTG CGGTAGCTTT CCTGGCCACT
CCGGCCGCTG CCTATATCAC AGGTACCAAT ATCTGTGTCG ATGGAGGCAG AACACCTGTA
CTCTAA
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| Protein sequence | MELSLKGKTA VICGSTQGIG LATAGELAAL GAECILLARN KESLKTAVAG LATDHLQEHS
YVVADFRDTQ QVEQAIKSIT EKQTVHILVN NTGGPKAGPV MEADIHEFTD AFQQHLIINH
ILVQAVIAGM TAAGYGRIIN IVSTSVKAPL KNLGVSNTIR GGVASWAKTM AGELAPYGIT
VNNVLPGMTN TARLQSMLEY NASKRNTTLN NIEEEYLKEI PMKRFGDPKE IAAAVAFLAT
PAAAYITGTN ICVDGGRTPV L
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