Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1461 |
Symbol | |
ID | 8357602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1791261 |
End bp | 1792691 |
Gene Length | 1431 bp |
Protein Length | 476 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963641 |
Product | hypothetical protein |
Protein accession | YP_003121159 |
Protein GI | 256420506 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACTAA TTAAATATAT ATTGGGTCTG GCTGGCGCCG CAGTGATACT GAGCAGTTGC CAGAAACAGC TGGAGGACAT CAACAAGAAT CCGAATGAAT CAGAACAGGT GCAGCCGGAT TATCTGCTGA CCAACGGTAT CAAAGCGAAC GTGGATACTT ACTGGGGTAC TGATGCGGCG ATGGAAACGA GCCTGCTGTA TGTACAATAC TGGGCAAAGA TCCAGTATAC TGATCCTGAC AGGTATATTC CTGCTGCGAC CAGTGTCCAG GCGGTATGGA ATAACTTTTA TGCACAGGGC GTGGCGGATT TCACCAAACT TATAGAGCTG GGTGATACGC TGCACAACCC TAACTATAAA GCAGTGGGTA TCATCATGCG TTCATGGATA TTCCAGGTGC TGACCGATTT TTACGGTGAT ATTCCTTATT CTCAGGCTGC ACAGATCGAT AAATACCTGA CGCCAAAATA TGATGCGCAG AAAGATGTTT ATCTCGGTCT GCTGGCAGAA TTGAAAACTG CTTCAGGATT AATCACACCA GCTGCAAATA CCATCGCCGG AGATATCCTT TACAATGGCG ACATGAATAA ATGGAAGAAG TTTGCGAATT CCCTGCGACT GCGTATTGCA CTGCGTATTT CTGATAAGGA GTTTGCTGCG GCAAAAGCTG TATTCGACGA AATCGGTGCG GATGATAACA ACCTGATCGT AAGCAATAGC GATAACGCGC AACTGGTATA CCAGGCTTCT CCGAATCAGA ACCCGGTAGC AAAGAACAGG GAGACACGTA ACGATTACAG GATCAGCAAG AGTATTGTTG ATAAACTGAA TCAGCTGAAT GACCCTCGTT TACCGATTTA TGGTGCGGTA CCAAGAGATA CCAACAAGAT TGTAGGTGTG ACAAATGGTC TGGCTACTGA TTCTGCTGCA CGTCTTGGCT TCAATAAAAC TTCTGACGTA GGCGCTGTAT TTACCGCGAC TGCTGCACCA GCGGTATTAT TCAATGCATC AGAATTATTG TTCATTAAAG CAGAAGCAGC GCAGATCGGT TTATTATCCG GTAATGCAGC TACCCTGTAT GCACAGGCAG TAACAACTTC TCTGAAACAA TATGGTGTAA GCGATCTGAA TGTGACTACT TATCTGGCGC AACCAGCAGT ATTGTATGAT GCGGCTAATT ACAGGAAGTC AATAGGAGAG CAGAAGTGGC TGGCGCTGTT TGGCGACGGA CTGGAAGGTT TTGCGGAGTG GCGCAGACTG GATTATCCCA AGTTACCGGC TGCTTACACC GGTGCATTGG GTGGTAAGAT CCCTGCAAGA ATGACTTATC CTTCTTCAGA GCAGGCGTTG AACGGGACGA ATTACAAAGA CGCTATTGGC AGACAGGGCG CAGATGCCTT GACTACCCGT TTATGGTTTG ACAAAGAATA A
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Protein sequence | MKLIKYILGL AGAAVILSSC QKQLEDINKN PNESEQVQPD YLLTNGIKAN VDTYWGTDAA METSLLYVQY WAKIQYTDPD RYIPAATSVQ AVWNNFYAQG VADFTKLIEL GDTLHNPNYK AVGIIMRSWI FQVLTDFYGD IPYSQAAQID KYLTPKYDAQ KDVYLGLLAE LKTASGLITP AANTIAGDIL YNGDMNKWKK FANSLRLRIA LRISDKEFAA AKAVFDEIGA DDNNLIVSNS DNAQLVYQAS PNQNPVAKNR ETRNDYRISK SIVDKLNQLN DPRLPIYGAV PRDTNKIVGV TNGLATDSAA RLGFNKTSDV GAVFTATAAP AVLFNASELL FIKAEAAQIG LLSGNAATLY AQAVTTSLKQ YGVSDLNVTT YLAQPAVLYD AANYRKSIGE QKWLALFGDG LEGFAEWRRL DYPKLPAAYT GALGGKIPAR MTYPSSEQAL NGTNYKDAIG RQGADALTTR LWFDKE
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