Gene Cpin_1461 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1461 
Symbol 
ID8357602 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1791261 
End bp1792691 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content46% 
IMG OID644963641 
Producthypothetical protein 
Protein accessionYP_003121159 
Protein GI256420506 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACTAA TTAAATATAT ATTGGGTCTG GCTGGCGCCG CAGTGATACT GAGCAGTTGC 
CAGAAACAGC TGGAGGACAT CAACAAGAAT CCGAATGAAT CAGAACAGGT GCAGCCGGAT
TATCTGCTGA CCAACGGTAT CAAAGCGAAC GTGGATACTT ACTGGGGTAC TGATGCGGCG
ATGGAAACGA GCCTGCTGTA TGTACAATAC TGGGCAAAGA TCCAGTATAC TGATCCTGAC
AGGTATATTC CTGCTGCGAC CAGTGTCCAG GCGGTATGGA ATAACTTTTA TGCACAGGGC
GTGGCGGATT TCACCAAACT TATAGAGCTG GGTGATACGC TGCACAACCC TAACTATAAA
GCAGTGGGTA TCATCATGCG TTCATGGATA TTCCAGGTGC TGACCGATTT TTACGGTGAT
ATTCCTTATT CTCAGGCTGC ACAGATCGAT AAATACCTGA CGCCAAAATA TGATGCGCAG
AAAGATGTTT ATCTCGGTCT GCTGGCAGAA TTGAAAACTG CTTCAGGATT AATCACACCA
GCTGCAAATA CCATCGCCGG AGATATCCTT TACAATGGCG ACATGAATAA ATGGAAGAAG
TTTGCGAATT CCCTGCGACT GCGTATTGCA CTGCGTATTT CTGATAAGGA GTTTGCTGCG
GCAAAAGCTG TATTCGACGA AATCGGTGCG GATGATAACA ACCTGATCGT AAGCAATAGC
GATAACGCGC AACTGGTATA CCAGGCTTCT CCGAATCAGA ACCCGGTAGC AAAGAACAGG
GAGACACGTA ACGATTACAG GATCAGCAAG AGTATTGTTG ATAAACTGAA TCAGCTGAAT
GACCCTCGTT TACCGATTTA TGGTGCGGTA CCAAGAGATA CCAACAAGAT TGTAGGTGTG
ACAAATGGTC TGGCTACTGA TTCTGCTGCA CGTCTTGGCT TCAATAAAAC TTCTGACGTA
GGCGCTGTAT TTACCGCGAC TGCTGCACCA GCGGTATTAT TCAATGCATC AGAATTATTG
TTCATTAAAG CAGAAGCAGC GCAGATCGGT TTATTATCCG GTAATGCAGC TACCCTGTAT
GCACAGGCAG TAACAACTTC TCTGAAACAA TATGGTGTAA GCGATCTGAA TGTGACTACT
TATCTGGCGC AACCAGCAGT ATTGTATGAT GCGGCTAATT ACAGGAAGTC AATAGGAGAG
CAGAAGTGGC TGGCGCTGTT TGGCGACGGA CTGGAAGGTT TTGCGGAGTG GCGCAGACTG
GATTATCCCA AGTTACCGGC TGCTTACACC GGTGCATTGG GTGGTAAGAT CCCTGCAAGA
ATGACTTATC CTTCTTCAGA GCAGGCGTTG AACGGGACGA ATTACAAAGA CGCTATTGGC
AGACAGGGCG CAGATGCCTT GACTACCCGT TTATGGTTTG ACAAAGAATA A
 
Protein sequence
MKLIKYILGL AGAAVILSSC QKQLEDINKN PNESEQVQPD YLLTNGIKAN VDTYWGTDAA 
METSLLYVQY WAKIQYTDPD RYIPAATSVQ AVWNNFYAQG VADFTKLIEL GDTLHNPNYK
AVGIIMRSWI FQVLTDFYGD IPYSQAAQID KYLTPKYDAQ KDVYLGLLAE LKTASGLITP
AANTIAGDIL YNGDMNKWKK FANSLRLRIA LRISDKEFAA AKAVFDEIGA DDNNLIVSNS
DNAQLVYQAS PNQNPVAKNR ETRNDYRISK SIVDKLNQLN DPRLPIYGAV PRDTNKIVGV
TNGLATDSAA RLGFNKTSDV GAVFTATAAP AVLFNASELL FIKAEAAQIG LLSGNAATLY
AQAVTTSLKQ YGVSDLNVTT YLAQPAVLYD AANYRKSIGE QKWLALFGDG LEGFAEWRRL
DYPKLPAAYT GALGGKIPAR MTYPSSEQAL NGTNYKDAIG RQGADALTTR LWFDKE