Gene Cpin_1455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1455 
Symbol 
ID8357596 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1780789 
End bp1781685 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content48% 
IMG OID644963635 
Productaldo/keto reductase 
Protein accessionYP_003121153 
Protein GI256420500 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTACA ATATACTTGG CAATTCCAAT CTCGATATCA GTGAGATCGC ATTTGGGTGT 
ATGTCCCTGG GTGATAACGC TGCTGAAAAT GAAAACCTGA TCGCACAGGC GCTTGATAAA
GGTATTAACT TCTTTGATAC AGCAGACCTT TATAAGCAGG GAGAGAATGA AAAGCAACTC
GGTAAGGCAT TAAAAGACAG AAGAAATGAT GCAATCATTG CCACCAAAGT GGGGAATCAA
TGGCGTGCGG ATGGAAGTGG ATGGGACTGG AATCCGAGTC CTGAATATAT CAGGAAGGCC
GTGGAAGACA GTCTGCGCAG ACTGAACGTT GAGTATATAG ACCTCTACCA GCTGCATGGC
GGTACCCTGG AAGATCCTAT TGATGATATT GTGGACACCT TTGAGCGCTT GCAACATGAC
GGGAAGATCC GTTATTATGG AATCTCTTCG ATCAGACCCA ATGTGATCCG GGAATGGATA
CAGCGCTCCA ATATGAGCAG TGTGATGATG CAATACAGTC TGCTGGACAG ACGGCCGGAA
GAAGATATGC TGCCATTACT GGATAAACAT AACATCGGTG TACTGGCGAG AGGTAGTGTC
GCCAAAGGGC TGCTGGCAGG AAAACCTGCG GAGTCTTATC TGAACTATAG TGCAGAAGAT
GTGCATAAGA TGGCGAATGC CGTACAGCAG ATTTCGGCTG ATAAGCGTAC GCCGGCACAA
ACCGCAATGT GTTATATTCT GGGAGAACCG GCTGTAAGAG CCGCTGTGGT AGGAATAAGA
ACGCTGACGC AACTGGACGA AGCGGCAGGA TTGCCGTTGA CCACGCCACT TACGTCAGCG
GAAAGAGTCA TGTTAGGATA CGAGCTGGTC GCAAATTATT ACGACCAGCA TCGCTGA
 
Protein sequence
MNYNILGNSN LDISEIAFGC MSLGDNAAEN ENLIAQALDK GINFFDTADL YKQGENEKQL 
GKALKDRRND AIIATKVGNQ WRADGSGWDW NPSPEYIRKA VEDSLRRLNV EYIDLYQLHG
GTLEDPIDDI VDTFERLQHD GKIRYYGISS IRPNVIREWI QRSNMSSVMM QYSLLDRRPE
EDMLPLLDKH NIGVLARGSV AKGLLAGKPA ESYLNYSAED VHKMANAVQQ ISADKRTPAQ
TAMCYILGEP AVRAAVVGIR TLTQLDEAAG LPLTTPLTSA ERVMLGYELV ANYYDQHR