Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1447 |
Symbol | |
ID | 8357588 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1761311 |
End bp | 1762126 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963627 |
Product | alpha/beta hydrolase fold protein |
Protein accession | YP_003121145 |
Protein GI | 256420492 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 46 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCAGTCA TCAAAGTAAA AAACAACAGC GTTCATATCC AGGAATACAA TAAGGGTGCG AAAGAAACGA TTGTATTAAT CCATGGTATG TTCAGCAATC TCTCTGTGTA TTATTTCAAT ATCGCACCTG TGCTTGCACA GTCTTTTCAC GTGGTGTTAT ATGACATGAA AAGTCATGGT ATGAGCGATC GCTGTGAGTA TGGCTATGAC CTGCTGTCTA TGACAGACGA CCTTCGTGAC CTGATGGATG CATTACATCT GAAATCGGTA TACCTGGCTG GTTACAGTTA TGGTGGACTG GTAGCCATGA AAATGGCGAT GCGATATCCC GCCAGGGTGA AAAAACTGGC GGTGATCGAA GCACCTGACC CCAGTGACAG CGAAACACTG AGCATCATCG ATATCTACAG CAAAGAATTC CTGGTAGACT ATATCAACAA TTATACGGAT ACCACGCGTA TGCGCGTAGG TAAGCGGCAG CTGGATAAAA ATCACCGGAT GTATGAATTC CTATTTTATC GGACCAGTAT TAAGGAAGAT ATGCATAATG AACGCTTCTT CTTCTCTGCT GAGGCGCTGG ACAGTATTCC ACAGGAAACA CTGCTGATCT ATGGCAAATC ATCCAATTGT CTGCCGTCGG GCAGGAAGCT ATATCACACC ATACCCCGTT CCAAACTGAT ACTTATCGAG GGAGATCATA ATCTGCCGAT ACAACAGCCG GCAGAAACAG CAGGTAAACT GAAAGATTTC TTTGAAGGAT GGCAGATCAA AATCAAACAG ATCAATAACA GACTATGGCA AGCTTTGCGT TTATAG
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Protein sequence | MPVIKVKNNS VHIQEYNKGA KETIVLIHGM FSNLSVYYFN IAPVLAQSFH VVLYDMKSHG MSDRCEYGYD LLSMTDDLRD LMDALHLKSV YLAGYSYGGL VAMKMAMRYP ARVKKLAVIE APDPSDSETL SIIDIYSKEF LVDYINNYTD TTRMRVGKRQ LDKNHRMYEF LFYRTSIKED MHNERFFFSA EALDSIPQET LLIYGKSSNC LPSGRKLYHT IPRSKLILIE GDHNLPIQQP AETAGKLKDF FEGWQIKIKQ INNRLWQALR L
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