Gene Cpin_1447 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1447 
Symbol 
ID8357588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1761311 
End bp1762126 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content44% 
IMG OID644963627 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003121145 
Protein GI256420492 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones46 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGTCA TCAAAGTAAA AAACAACAGC GTTCATATCC AGGAATACAA TAAGGGTGCG 
AAAGAAACGA TTGTATTAAT CCATGGTATG TTCAGCAATC TCTCTGTGTA TTATTTCAAT
ATCGCACCTG TGCTTGCACA GTCTTTTCAC GTGGTGTTAT ATGACATGAA AAGTCATGGT
ATGAGCGATC GCTGTGAGTA TGGCTATGAC CTGCTGTCTA TGACAGACGA CCTTCGTGAC
CTGATGGATG CATTACATCT GAAATCGGTA TACCTGGCTG GTTACAGTTA TGGTGGACTG
GTAGCCATGA AAATGGCGAT GCGATATCCC GCCAGGGTGA AAAAACTGGC GGTGATCGAA
GCACCTGACC CCAGTGACAG CGAAACACTG AGCATCATCG ATATCTACAG CAAAGAATTC
CTGGTAGACT ATATCAACAA TTATACGGAT ACCACGCGTA TGCGCGTAGG TAAGCGGCAG
CTGGATAAAA ATCACCGGAT GTATGAATTC CTATTTTATC GGACCAGTAT TAAGGAAGAT
ATGCATAATG AACGCTTCTT CTTCTCTGCT GAGGCGCTGG ACAGTATTCC ACAGGAAACA
CTGCTGATCT ATGGCAAATC ATCCAATTGT CTGCCGTCGG GCAGGAAGCT ATATCACACC
ATACCCCGTT CCAAACTGAT ACTTATCGAG GGAGATCATA ATCTGCCGAT ACAACAGCCG
GCAGAAACAG CAGGTAAACT GAAAGATTTC TTTGAAGGAT GGCAGATCAA AATCAAACAG
ATCAATAACA GACTATGGCA AGCTTTGCGT TTATAG
 
Protein sequence
MPVIKVKNNS VHIQEYNKGA KETIVLIHGM FSNLSVYYFN IAPVLAQSFH VVLYDMKSHG 
MSDRCEYGYD LLSMTDDLRD LMDALHLKSV YLAGYSYGGL VAMKMAMRYP ARVKKLAVIE
APDPSDSETL SIIDIYSKEF LVDYINNYTD TTRMRVGKRQ LDKNHRMYEF LFYRTSIKED
MHNERFFFSA EALDSIPQET LLIYGKSSNC LPSGRKLYHT IPRSKLILIE GDHNLPIQQP
AETAGKLKDF FEGWQIKIKQ INNRLWQALR L