| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1446 |
|---|
| Symbol | |
|---|
| ID | 8357587 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1760133 |
|---|
| End bp | 1761332 |
|---|
| Gene Length | 1200 bp |
|---|
| Protein Length | 399 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 644963626 |
|---|
| Product | glycosyltransferase, MGT family |
|---|
| Protein accession | YP_003121144 |
|---|
| Protein GI | 256420491 |
|---|
| COG category | [C] Energy production and conversion
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1819] Glycosyl transferases, related to UDP-glucuronosyltransferase |
|---|
| TIGRFAM ID | [TIGR01426] glycosyltransferase, MGT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 48 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAAGCT TTGCGTTTAT AGTTCCCCCG CTGATGGGGC ATATTAATCC GACGCTTAGT
CTGGGAGCCG CGCTACTACA ACGCGGACAC CGGGTAGGCT GGATCGGTCT TGATGCGACA
CTGGCAGGTA AGCTACCGGA AGGAGGTGAA CTGTTACACA TACAATACGA CCAGGATGAT
GCTGCTAAAA AAGACAATGA GCAATATCTT GATCAGATCA CCAAAAAGAA TGTTTCCGGT
ATTGAAAGTA TCAAGTTCCT GTATGAGGAT GTCCTGATCC CGCTGAACAG GTTTATGTAT
GATGGCATCG TCAGTATACT ACAGCGCTTT CAGCCAGATG TTATTATACA TGATCATCAG
TTGTTTGCCG GCGCTATTGC AGCCTATCAG CTGGAAATAC CCTATGCTAC CTCTGTTACT
GCACCAGCAG CCATTAAAAT GATGGAAGAC CTGCCGGGTA TACATGAATG GGAGATCAGA
CAGATCGTAG GTTTACAGCA GGAACTGGGT ATTCCCGGAG ACACTTCCGT AGCCACCTCT
GAAGCCCTGA CATTGGTATA TACCTCTAAA GCTTTTTTTG GCGATATGGC GCTACCGGAC
CATTATAAGT TTGTAGGCCC GGTGATACTG AACAGGCAAT CCCTTCATCC ATTCGACTGG
GAGCGGTTCA GGCAGTTGGT TAAACAACCA CGGGTACTGG TGTCGATCGG CACTACATTC
GACCATAGTT ATAAAAAAGA TTTTTTCGGA AAGGTCATAG CAGCATTAGG CGGAGAGCCT
GTCTCTGTGA TCGTCGTGTC AGACGTCAGT CTGTTTGAAG AGTGGCCTGA CAATTTTATC
GTACAGGAGA AAGTTCCGCA GCTGGAACTC CTGCCTTATC TGGATGCAGT CGTGTGCCAT
GGCGGCCATA ACACCGTATG TGAAACCTTA TCTCATGGCC TGCCATTGGT GGTTATCCCT
ATAGCCTATG ATCAATCGCA TGTGGCAGGA AGAGTGATAC AGGCGGAAAG CGGTGTACGA
CTGAATTATA AACGGTTTAA GGCGGAACAT CTGAAAACGG CTGTACGGGA CGTACTGACC
AATCCATCCT ATAAAACAGC TGCACAACGC ATACAGCATT CCTTTGCGCA GGCAGGTGGC
GCGGCCACTG CCATTGCTTT ACTGGAAGAA CTGGCTATCC CTAAACATTT CCATCATTAA
|
|---|
| Protein sequence | MASFAFIVPP LMGHINPTLS LGAALLQRGH RVGWIGLDAT LAGKLPEGGE LLHIQYDQDD
AAKKDNEQYL DQITKKNVSG IESIKFLYED VLIPLNRFMY DGIVSILQRF QPDVIIHDHQ
LFAGAIAAYQ LEIPYATSVT APAAIKMMED LPGIHEWEIR QIVGLQQELG IPGDTSVATS
EALTLVYTSK AFFGDMALPD HYKFVGPVIL NRQSLHPFDW ERFRQLVKQP RVLVSIGTTF
DHSYKKDFFG KVIAALGGEP VSVIVVSDVS LFEEWPDNFI VQEKVPQLEL LPYLDAVVCH
GGHNTVCETL SHGLPLVVIP IAYDQSHVAG RVIQAESGVR LNYKRFKAEH LKTAVRDVLT
NPSYKTAAQR IQHSFAQAGG AATAIALLEE LAIPKHFHH
|
|---|
| |