Gene Cpin_1434 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1434 
Symbol 
ID8357575 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1745349 
End bp1747982 
Gene Length2634 bp 
Protein Length877 aa 
Translation table11 
GC content47% 
IMG OID644963614 
Productamino acid adenylation domain protein 
Protein accessionYP_003121132 
Protein GI256420479 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1020] Non-ribosomal peptide synthetase modules and related proteins 
TIGRFAM ID[TIGR01733] amino acid adenylation domain 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGGAGA GACAAGTAAC ACATGAACGG AATCCCACAC CTACATCGGA AACTCGCATT 
TCAAATCCAC TGGACCTACG TTCTCTGCAG GAACTCATCC ATGAAAAAGC GTTGCTCTAC
CCCGATAAGT CCGCCTTGCG CTTCAGGGAT CATGTAATAA CATATCATAA ATTAAATAAT
TCTGCAAACC AATTTGCCAG ACTGCTGGCG GACTATGGCA TTCGCAAGGG TACTATAGTA
GGGCTTGCTG TAGATCGTTC TCCGGAGATG CTCTACTGTA TGTTGGCTAT TGTAAAGGCT
GGGGCAACTT ATCTGCCGCT GGACCCTGAG TATCCACAGG CAAGGATTGA ATTTATGTTA
CAGGATGCAG CAGCTGCTTA CCTGATTACA TCTGAGAAAT ATAGTGGCAG GTTTCAGACA
GCGGCAAAGG AGATATTAAT GGAAGATCTG CTGAGGCAGG CGCCACAATA CGATGTATCA
CCACCTGATG CAGCAATCAC GATGCAGGAC GTGGTGTATG TATTGTACAC ATCAGGCTCT
ACAGGACAAC CCAAAGGTGT ACAGATCACA CAGTTGGGAC TGGTTAATTT CCTGATTGGT
ATGTTGAAAG AACCAGGTCT TGATCAACAT GATAAAGTGC TTGCGCTGAC GACTATTTCT
TTTGATATAT CCGGTCTTGA ATTATATCTG CCATTACTCG TTGGCGCCGA AGTCGTCCTC
ACGGATGTAC AGACATCCAG GGATACCCGT CATCTCATGG AGATCGTCAG ACAGCAAGGT
ATAACCGTCA TGCAGGCTAC ACCGGCTACC TGGAGAATGA TGCTGGAATC TGCCTGGGAT
GATCGCCTGC CATTAAAAGC CTTAATAGGT GGAGAAGCCC TGTCTAAAAA ACTGGCGGAA
AGACTGCTGG AAAAATGTGA TAGTCTCTGG AACATGTATG GTCCTACAGA GACTACTGTG
TGGGCTACAC TAAAAAAGAT CAATATAGAC GATGAGATTA TTACTGTCGG CCGGCCGATA
GAGAACATGT TCGCTTACAT CCTGGACAAC CAGCTTAGGA GAGTGCCGGA CGGTACCGTG
GGAGAAATAT TCATCGGTGG TGTGGGCGTC GGGGTTGGCT ACCTGAACAG GCCGGCTTTG
AATGAAGAAC GTTTTATGCC GGATCCTTTT TCGCCTTTAC CTGGCGCCCG TATGTACAAG
ACGGGCGATC TTGGAAGGAT TGTGAACGGT GGAGAAATCC AGTGTCTTGG GAGAATGGAT
CACCAGGTAA AGATCAGGGG ATACCGTATT GAGTTGGGAG AGGTGGAACA TGCCCTGGGT
AAACAGACTG GTATCAAAGA TGTGGTCGTA TTGCCCAAAG ATGAAAGACT CATCGCTTAT
GTCGTTCAGG AGAATGGTAC ACTTCCTAAT TTCTCTGCCT GGCAACAGGC GCTGAAAACG
TCATTACCGG AGTATATGGT CCCAAGCAAC TTCGTCCTGT TGCCCAGATT CCCGCTATCA
CCAAACGGAA AGGTAGACAG GAATGCGTTG GAGGCCATGG GACAGGAGAT AGAGAAAGCT
AACCGTGTAT ACACAGCGCC CCGTACTGAA CAGGAGAAGT TGATTGCAAA GATCTGGGAG
GATTATCTCT ATGTGGAGAA AGTTGGTATA AAAGACGATT TCTTCGAATT AGGCGGAACC
TCCATCGTTG CTATGCAGAT CATGGCCCGC ATAGAAAAGG AGACTGGCAA GAGGCTCCCG
CTGGCCAGCC TTTTCACTGC TAACACTGTT GAGAAGTTAG CCACCGAGAT GGAACTGGAT
GATCAATCTA TTTCCTGGGA TCTGCTCGTC CCTGTTAAAC CTACTGGAAC CAAACCGCCT
ATATTTATCG TGAACGGCCT GGATATGAAT GTCCTGCTGT TCAACAATAT CGCCCGTAAT
ATGGAGCCTG ACCAACCGGT ATATGGTTTT CAGCCCCGCG GACTCAACGG TGTTGATGAA
CCCTTCGAAA CACTGGAAGA TATGGCGGCG GAGTATATTG CTGCATTACT CGAAAGAGAT
TTTCCTGATG GCTATGCACT GGCAGGATAC TCTTACGGTG GGGTGGTAGC TTATGAAATG
AGCCGGCAAT TACAGGCGAT GGGAAAGAAA GTAAAAATGC TGGCCATGTT TGATACTTAT
GCTTACAACA AAGGCCACTT TGAAACGGGC GTACCTAAGT ACATCCGTAA GATTAAACGT
CAGTTCCCCA AGTTCCTTTT TATCACACAA TCTTTAATCC GGCATCCCAA AGAAACGCTG
GATTATCAGC AGGCATTTTT TGTACGGAAA TACAATGAGA TCGCTGTCTA TATCGGATTG
CAAAGACCGC CTGAATCTGA TCGGGCGGAA GATAAGATCA ATGAGAAATA CGAAGCGGCT
TACCGTAAGT ACCATATGCA GACGTCTGAC GCATGTGCTA TTGACCTGTT CCGTGTGGAT
ACCCGTCTTT ATTATCTGGA TGATCCGCTT TACCTTGGAT GGAAGCCATA TGCTTTGAAA
GGGATCAATG TGCATGACGT AAAAGGGGAT CACAAAACAT TTCTCATGCC GCCTAATGAT
AAAGATTTCG CTATCTTGCT GCAACAATTG GTAGATGAGC GAATGAAAGC CTGA
 
Protein sequence
MSERQVTHER NPTPTSETRI SNPLDLRSLQ ELIHEKALLY PDKSALRFRD HVITYHKLNN 
SANQFARLLA DYGIRKGTIV GLAVDRSPEM LYCMLAIVKA GATYLPLDPE YPQARIEFML
QDAAAAYLIT SEKYSGRFQT AAKEILMEDL LRQAPQYDVS PPDAAITMQD VVYVLYTSGS
TGQPKGVQIT QLGLVNFLIG MLKEPGLDQH DKVLALTTIS FDISGLELYL PLLVGAEVVL
TDVQTSRDTR HLMEIVRQQG ITVMQATPAT WRMMLESAWD DRLPLKALIG GEALSKKLAE
RLLEKCDSLW NMYGPTETTV WATLKKINID DEIITVGRPI ENMFAYILDN QLRRVPDGTV
GEIFIGGVGV GVGYLNRPAL NEERFMPDPF SPLPGARMYK TGDLGRIVNG GEIQCLGRMD
HQVKIRGYRI ELGEVEHALG KQTGIKDVVV LPKDERLIAY VVQENGTLPN FSAWQQALKT
SLPEYMVPSN FVLLPRFPLS PNGKVDRNAL EAMGQEIEKA NRVYTAPRTE QEKLIAKIWE
DYLYVEKVGI KDDFFELGGT SIVAMQIMAR IEKETGKRLP LASLFTANTV EKLATEMELD
DQSISWDLLV PVKPTGTKPP IFIVNGLDMN VLLFNNIARN MEPDQPVYGF QPRGLNGVDE
PFETLEDMAA EYIAALLERD FPDGYALAGY SYGGVVAYEM SRQLQAMGKK VKMLAMFDTY
AYNKGHFETG VPKYIRKIKR QFPKFLFITQ SLIRHPKETL DYQQAFFVRK YNEIAVYIGL
QRPPESDRAE DKINEKYEAA YRKYHMQTSD ACAIDLFRVD TRLYYLDDPL YLGWKPYALK
GINVHDVKGD HKTFLMPPND KDFAILLQQL VDERMKA