| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1424 |
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| Symbol | |
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| ID | 8357565 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1734557 |
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| End bp | 1737118 |
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| Gene Length | 2562 bp |
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| Protein Length | 853 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963604 |
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| Product | hypothetical protein |
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| Protein accession | YP_003121122 |
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| Protein GI | 256420469 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.669741 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGAAAA ACACCATCCG TACCGTCGCC ACAACAGCTG GTACGCTTCT GTTGATACTG
AGTATCAACA CTATGTCGAT AGCACAAAAG CGAAAGAAGA CCCAACAGGA ACCTATTCCC
GCTAAAGATT CGACTGCACG TCCGCCTATG CCCGCTAAAA GCGGTCCAAA AACAGCTCCC
AAAAAATTCA GCGAAGTCAT TACATCCGCT GCTGTAGCAG ATTCCGGTCT GTTCAATATC
TATAAGCAGG ATGACAAAGT ATTTTTTGAA ATAGCTGACT CCCTCCTTGG AAGAGATATT
CTCGTCGTAA ACCGTATTTC AAAATCAGCC GCAGGCCTGC GCGCTGCAAT GATGGGATAC
AGCGGAGACG AAATCGGTGA AAACGTGATC CGGTTTGAAA AAGGACCCAA TAACCGCATT
TTCCTGAAGA ACATTTCCTA TTCTGAAATC TCCAGAGATT CCAGTCAGCC AATGTTTAAC
GCTGTAATGA ATTCCAACAT ACAACCCATT GCAGCTGCGT TTGATATCAA GGCTTTCTCT
GAAAAAGGAA AAAGTACTAT TATCGATCTT ACTGAATATA TCCAGGGTGA TAACGATATC
TTCTTCTTTG ACTCCCGCGT GAAAGGCATG TTCAAACTGG GCGCCGTTCA GCAGGATAAG
TCATATATAG TAGATGTCAA ATCTTATCCT ATCAATACAG AGATCAAAAC AGTAAAGACT
TATTCCAAAT CTGGTGGCCA GCCTGGTCCA GGTATGCCTG TACAGGGTGG AAACGCCACA
CTGGAGCTGA ACTCATCTAT GATTCTGCTG CCAGCGGTAC CGATGAAAGC CCGGTACTTT
GATCCACGTG TGGGTTACTT TACCACTTCT GTAACTGATT TTGACCTGGA TCCACAAGGC
GTTAAACGCC TCTCCATGGT TACCCGCTGG AGACTGGAGC CTAAGCCTGA AGATCTCGAG
AGATATAAAC GCGGGGAACT CGTGGAACCC CTAAAGCCAA TCATATTTTA TATAGATCCG
GCTACGCCTA AAAAATGGGT ACCATACTTA ATTCAAGGTG TAAATGACTG GCAGGCAGCT
TTTGAAAAAG CAGGTTTCAA AAATGCAGTT GTTGCTAAAG TAGCGCCTAC GCGTGAAGAA
GATTCTACCT GGAGCCTGGA AGACGCTCGC TTCTCAGCGA TCGTTTACAA ACCTTCCGAT
ATTCCTAACG CGAGTGGTCC TCATATTCAC GATCCCCGTT CCGGCGAGAT CATGGAAAGC
CATATCAACT GGTATCACAA CGTGATGCGT TTACTGCGTA ACTGGTACTT TATACAGTGT
GCGCCCAACG ATGCCCGTGC ACGTAAAATG CAGTTTGACG ACCAACTGAT GGGAGAACTG
ATCAGATTCG TATCCTCTCA TGAAGTAGGT CACACACTAG GCCTCCGTCA CAACTTCGGT
TCCAGCTCAA CCTATCCTAC TGAGAAGTTA AGGGATAAAG CATGGACTAA AGAAAATGGT
TTTGCAGCGT CTATTATGGA CTATGCCCGT TTCAACTATG TAGCACAACC AGAAGATGGT
ATCTCCGGCG CTGATCTTTA CCCTCGTATC AACTTCTATG ATAAATGGGC TATTGAATGG
GGCTATAAAC TGATCCCTGA TGCAGCTACA GCAGATGCAG AAAAAGCAGT ACTTAATAAA
TGGACAGTTG AAAAACTGAA GGAGAAGAAA TATTGGTTTG GTACAGAAAT GAACCCTGAT
GATCCAAGAT CACAGAATGA AGATCTTGGT GATAATGCAA TGAAATCGGG TATATATGGT
ATCAAAAACC TGCAGCGTAT TATGCCTAAC CTCCTGACCT GGACGAAAGA AGAGAATGAA
GGTTATGGCA ATCTTACTGA ACTCTATCGC GAAGTGAATA CACAGTTTGG TCGTTATCTC
GGACATGTCG CCAAAAACAT TGGTGGTATA TATGAAACAC CGAAAACAGT AGAGCAGGAA
GGCGGCGTAT ATGAAGCAGT GCCAAAAGTT ATACAGCTGG AAGCTGTTCA GTTCCTGAAC
GATCAGGTAT TCACCACACC TAAATGGTTA CTTGATAAGG ACATCTTATC GCGTACAGGC
AACAACGCAA CCACTATTGT CGGCGCGCGT CAGACCCCTG TATTAGATCG CATACTGAGT
GCTAATACAC TCGTAAAACT GATCAACAAT GAAGCGAATG ACGGCGCTGG CAGTTACCAG
GCTACTGCAT TCCTGAATGA TGTTAAAAAA GGCATCTTCA GCGAAGTATA CAGCAGAAAG
AATATCGACG TATTCCGTCG TAACCTGCAG AAATCATATG TTGATCATGT TATTCAGCTG
CTGGCTTCTA AAGACCAGTC TTCCATGGGT GGTATGATTA TCATGTTCGG CCCTGCACCC
GCAGATCCGA CAAAATCAGA TGTGAGCAGT ATTGCACGTG CACATCTTGT ATCTCTGCGT
ACCGATATCC GTGCCGCAGC TGCAACTATA CAGGATCCAC TGAGCCGTTA TCATCTGAGC
GATCTTGCTG AAAGAATCAG CCAGGCTCTC GAACCTAAAT GA
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| Protein sequence | MKKNTIRTVA TTAGTLLLIL SINTMSIAQK RKKTQQEPIP AKDSTARPPM PAKSGPKTAP
KKFSEVITSA AVADSGLFNI YKQDDKVFFE IADSLLGRDI LVVNRISKSA AGLRAAMMGY
SGDEIGENVI RFEKGPNNRI FLKNISYSEI SRDSSQPMFN AVMNSNIQPI AAAFDIKAFS
EKGKSTIIDL TEYIQGDNDI FFFDSRVKGM FKLGAVQQDK SYIVDVKSYP INTEIKTVKT
YSKSGGQPGP GMPVQGGNAT LELNSSMILL PAVPMKARYF DPRVGYFTTS VTDFDLDPQG
VKRLSMVTRW RLEPKPEDLE RYKRGELVEP LKPIIFYIDP ATPKKWVPYL IQGVNDWQAA
FEKAGFKNAV VAKVAPTREE DSTWSLEDAR FSAIVYKPSD IPNASGPHIH DPRSGEIMES
HINWYHNVMR LLRNWYFIQC APNDARARKM QFDDQLMGEL IRFVSSHEVG HTLGLRHNFG
SSSTYPTEKL RDKAWTKENG FAASIMDYAR FNYVAQPEDG ISGADLYPRI NFYDKWAIEW
GYKLIPDAAT ADAEKAVLNK WTVEKLKEKK YWFGTEMNPD DPRSQNEDLG DNAMKSGIYG
IKNLQRIMPN LLTWTKEENE GYGNLTELYR EVNTQFGRYL GHVAKNIGGI YETPKTVEQE
GGVYEAVPKV IQLEAVQFLN DQVFTTPKWL LDKDILSRTG NNATTIVGAR QTPVLDRILS
ANTLVKLINN EANDGAGSYQ ATAFLNDVKK GIFSEVYSRK NIDVFRRNLQ KSYVDHVIQL
LASKDQSSMG GMIIMFGPAP ADPTKSDVSS IARAHLVSLR TDIRAAAATI QDPLSRYHLS
DLAERISQAL EPK
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