| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1421 |
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| Symbol | truA |
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| ID | 8357541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1698972 |
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| End bp | 1699724 |
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| Gene Length | 753 bp |
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| Protein Length | 250 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644963580 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_003121119 |
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| Protein GI | 256420466 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.126301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 38 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGATACT TTATAGAGGT AGCATACAAG GGTACCAGCT TTGGTGGTTT TCAGATTCAG
GATAATGTGG AGACGGTGCA GTCGGTTATT GATCATGCTA TCAGTACATT AATGAGAGGA
GCTATAGTAA CGACAGGTTC CAGTCGTACA GATGCGGGTG TACATGCAAG GCAGAACTTC
CTGCATTTTG ATATGGAGCA GCCATTGCAT CCGCAGTTTC TCTATAAGGT GAATGCGATA
TTGCCACCGG ATGTGGTGAT GCGTAATATA TACCGTGTAG CGGATGACGC GCATTCGAGG
TTTGCGGCAT TGAGTCGCTC TTATGAGTAT ACCTTATATA TGGAGAAGGA TCCGTTTATG
AGGGACAGGG GTTATTTCTT CCCGTATACG TTGCATCCGG AGCTGTTGCA TGAAGCGGCT
AGTGTGTTGA GAGAGTACGA GAACTTCATG ACGTTTTCCA AGCGGAATAC ACAGGTGAAG
ACATACAACT GTAATATCAT GTCGTCGGAG TGGGAAGTGG GAGAGGACCG TATCGTATAT
AGAGTGACGG CGAATCGTTT TTTAAGAGGT ATGGTGAGGG GAATGGTAGG TACGATGTTG
AGAGTAGGGC GGGGGAAGCT GACGATGGAT GGTTTCAGAG AGGCGATAGA AAGCCGTAAT
TGTGTGAATG CTGATTTCGC GGTACCGCCG CAGGGATTGT TTTTGATGAA GGTAGCTTAT
CCGGAGGGGA TGTTAGCGGA CAAGGTGCAA TAA
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| Protein sequence | MRYFIEVAYK GTSFGGFQIQ DNVETVQSVI DHAISTLMRG AIVTTGSSRT DAGVHARQNF
LHFDMEQPLH PQFLYKVNAI LPPDVVMRNI YRVADDAHSR FAALSRSYEY TLYMEKDPFM
RDRGYFFPYT LHPELLHEAA SVLREYENFM TFSKRNTQVK TYNCNIMSSE WEVGEDRIVY
RVTANRFLRG MVRGMVGTML RVGRGKLTMD GFREAIESRN CVNADFAVPP QGLFLMKVAY
PEGMLADKVQ
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