| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1419 |
|---|
| Symbol | |
|---|
| ID | 8357539 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1696491 |
|---|
| End bp | 1696991 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 644963578 |
|---|
| Product | biotin/lipoyl attachment domain-containing protein |
|---|
| Protein accession | YP_003121117 |
|---|
| Protein GI | 256420464 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.185754 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAAAG CTATTGTGAA TGGCGATCTG TCGTTTAAAG TCGCAACAGA TAAGTATGCA
GTTTCCTGTG ATGAACAGCC GGTGAATTGG TCGGGGATAT CATTACCAGG TGGTAATCAT
AGTGTTATAT TGAATGGGAA GAGCTATATA GCGCAGGTAG CCAAGATAGA CCGGGATACA
AAAACGGTCA CTATTATAAT AGATCAGCAG GAATACGAGG TGGCCATAGA AGAACCAATC
GATCAGTTGC TGGCGGAGAT GGGGATGAAA GATGCGTTGA GCCGGAAAGT AAATGATCTG
AAGGCGCCTA TGCCGGGATT GGTACTGAAA GTACTGGTAG AACCAGGGCA ATCGATAAAG
AAAGGTGATC CGGTATTGAT ACTGGAGGCG ATGAAAATGG AGAATGTCTT TAAGGCCGCG
ACAGATGCAG TAGTAAAAGA GGTAAAAGTA AAAGAGCGTA CGGCGGTGGA GAAAGGAGAG
GTACTGGTTA TCTTGGAATA G
|
|---|
| Protein sequence | MIKAIVNGDL SFKVATDKYA VSCDEQPVNW SGISLPGGNH SVILNGKSYI AQVAKIDRDT
KTVTIIIDQQ EYEVAIEEPI DQLLAEMGMK DALSRKVNDL KAPMPGLVLK VLVEPGQSIK
KGDPVLILEA MKMENVFKAA TDAVVKEVKV KERTAVEKGE VLVILE
|
|---|
| |