| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1416 |
|---|
| Symbol | |
|---|
| ID | 8357536 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | + |
|---|
| Start bp | 1691773 |
|---|
| End bp | 1692276 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 644963575 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003121114 |
|---|
| Protein GI | 256420461 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 37 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCACA CCCCTTTTCC ACCAGCTGCC CTGGCGTTTA TGCGTTTTGC CGGACAGCCC
TTCAGGTTTT CCCTGTATCT GTTCTGGAAA CTGCCTATCG CCTGGCTATC AGGCGTCCGC
CTGAAACAGC TGACGGAAAC GGGGTGTGTG ACAGTTATAC CCTTCAGGTG GTTATCTCAG
AACCCCTTTC GCTCCACCTA TTTTGCCTGC CTGGGCATGG CCGCCGAAAT GAGCACCGGC
TTACCGGCCA TGATGTATGT CAGAGGCGCA ACCCCCAAAC GTGTATCGAT GCTGGTGACT
GGTATGCAGG CCAGCTTTAT GAAAAAAGCG ACTGCTAAGA CCTGGTTTAC CTTTGAGGAA
GGAGCTATTC TCAGAGATGC AATCGCACGT ACGGCCGCCA GCGGCGAACC GGAAACAGTT
ACGGTTAACA GCATCGGCAG AAGCCACGAT GGCACAGTAA TTGCCTCGTT TGCTATTACC
TGGTCCTTTA AGGGCAAGGC TTGA
|
|---|
| Protein sequence | MEHTPFPPAA LAFMRFAGQP FRFSLYLFWK LPIAWLSGVR LKQLTETGCV TVIPFRWLSQ
NPFRSTYFAC LGMAAEMSTG LPAMMYVRGA TPKRVSMLVT GMQASFMKKA TAKTWFTFEE
GAILRDAIAR TAASGEPETV TVNSIGRSHD GTVIASFAIT WSFKGKA
|
|---|
| |