Gene Cpin_1411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1411 
Symbol 
ID8357531 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1683203 
End bp1686874 
Gene Length3672 bp 
Protein Length1223 aa 
Translation table11 
GC content47% 
IMG OID644963570 
Productmetallophosphoesterase 
Protein accessionYP_003121109 
Protein GI256420456 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4775] Outer membrane protein/protective antigen OMA87 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.569709 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTAGCA TTTTACCAAA AGCAAGACAC CTTTTACCCC TTCTATTCCT GCCATTGCTA 
TCTCAGGCAC AGATGACAGA TGACAGTCTC GCACGCAGAA TAATCCTGAT CGGCGATGCC
GGGGAACTGC ATAAAGACGG TCATAACCCT GTTATCGATG CCGTGAAACA ACGCATCAAC
CTCCAGGATG CCAGAAATAC CGTATTGTTC CTGGGCGATA ACGTATACCC GCTCGGCTTA
CCCGATGCAG GCGCCGCAAG ATATGACGAG GCCAGACAAA TACTTGACTA CCAGGTAGGA
CTGGTGAAAA ATACTGCCAC ACAAGCCATC TTTATCCCTG GTAACCATGA CTGGAAACGG
TCAAAACCAG ATGGATGGCA GACGGTGATC AATCAGCAGC TGTATATAGA TTCCTTACAA
CTGCCTAACG TCAACTTCCT GCCGAAGGAT GGTTGTCCCG GACCGGAAGA AGTACATCTC
GATAACAACA CCACCCTCAT CATTATGGAT ACTGAGTGGT GGCTGTTCCC TTACCAGAAA
CCCGGTTCCG AATCTTCCTG CGATACCAAA ACCCGGGAAG AAGTACTGGC AGAAGTCAGC
GACATCGTGA GCCGTAACAG AAATAAACTG ATCATATTCG CGGCACACCA TCCTTTCAGA
AGTTATAGCG TACATGGTGG CTATTATACC ATCAAGCAGC ATATCTTCCC TTTCACTGAT
CTGAAAAAGA ACCTGTACAT CCCATTACCG CTGATCGGAT CTATCTATCC GATCACGCGT
GGCGTGTTCG GTACGCCGGA AGATATTCCC AATCCGGTCT ATCAGTCAAT GATCAGAGGT
ATTGAAGCAG CGATCAAACC ACATGGACCG GCCATCTTCG TATCCGGCCA TGATCATACC
CTGCAGCTCA TTAACGACGA TCAGAACTTC TATGTCGTAA GTGGCTCAGG TGCGAAGGAA
AACCGTGTAA AAAAAGGCAG CAAGTCTTTA TACGCCAGCA ATGAAAACGG TTATACGGTA
CTGGAGATCT CCAAAAGCGG TCATGTAGAA GTGAAGTACT ACACTATCGA TAAGACAGAT
GGTCCTTCCT ACGCACAACA ACTGTTTAGT TTACAGGACG TTCGTTCCAG CACCATTGCT
AATACAAGTC CTTCCGCCAG TCAGTTACCG CCTACTGTCT CCATGGCAGC AGATTCACAG
TATATCAACA AAACCGGTTT CCATTACTGG CTGATGGGCC GCAACTACCG GAATGTATGG
GCAACGCCGA TGGACTTACC GGTACTGGAC CTGAATAAGG AACAAGGGGG TATGAAGATC
CTGAAACGTG GCGGCGGGAT GCAGACCATG TCCCTGCGAC TGGAAGATAA AAAAGGGACT
GAATGGGTAC TCCGCTCCCT GAAGAAATAT CCCGCGAAAG CGGTACCCGA AGCATTACGT
GAAACGATCG CCAAAGATGT CGTACAGGAC CAGATCTCAG CGGCCAATCC TTATGCTCCT
ATGGCTGTCG GTACATTAGC GGATGCGGCA GGTGTTCATC ATACTAATCC TAGATTTGTA
TATCTGCCGA AAGATACCGT ACTGGGTGTC TACGCTAACA CATATGGAGA TGACGTGTAT
CTCTTCGAGG AAAGAGAGCC GGATGTAAAA GGTAAAACCC TGAATACACC GAAGCTGCTT
GAACAGATAC AGGGCGACAA TGATAACACC GTTAACCAGG CAGCCGTACT GAATGCACGT
TTGCTGGACT GGCTGATGGC CGACTGGGAC CGTCATGACG ACCAGTGGAG ATGGGGAGCG
GAAAAGAGCA AAAAAGCAAA AACACAGGTA TACTTCCCGA TTCCACGTGA CCGCGACCAG
GCATTCTTTG TGAATGAAGG CTTTTTGCCG CGTGTCGCTT CCAGGAAATG GGCCTTGCCT
AATATCCAGG GCTTCCGTCC GAAGATCAGA TATATCGAAG GACAAAACCC TACGGCGCAA
CCATTTGACC GTTCTTTCAT GAACGAACTG AGTGAGCAGG AATGGAAAGA CATTTCCCAT
GCTTTCGTAC TGCGTATGAC AGATACTGTT ATCAGGAATG CCGTTAACCA GTTCCCTGAC
AATATCAGAT CACAGGTAGG TGAACGTGTA TACACCACCC TGAAAGCACG TCGTGACATA
CTGGAAAAAG AAGCCCTTCA GTTCTACAGC TTCATTTCCA AACATGTAGA AATAGTAGGC
ACTAAAAAAG ATGAGTTATT CACTATTGAG CGCCAGCCGG AAGGAAAAAT AGACGTTGCT
GTTACCAAGA TCAATAAAAA AGGAGAACTG GAACAAACGA TCTATCATCG CCTGTTTGAT
CCGAAAGACA CCCGTGAGAT CAGGATCTTT GGTCTGGGTG GCGAGGACAA ATATGTTGTA
AAAGGTGATA ACGGCTCTCC TATCAGGATT CGCGTCATCG GTGGCAGGAA TGTGGATACT
TATGTGGACA GCACCGGCAG TCATGCAGGT AAACGTATCC GTATCTATGA CCTGGCCAAC
AGGAAAGATA GTTTTGATAT GCATGGCAAT GACAGACGTA TCCTGTCTTC CAATCCTGAC
AACATCCGTT ACGAGCGCAC CTTCTTCCGT TACCAGTATA ATAAACTGAT GCCATTGGCT
TCTGCAGCCT TTAACCAGGA TGATGGATTG TCACTGGGAG CAGGTTTCCA ATATACCACA
CAGGGCTTCC GCAAACGTCC GTTTGCTACC AGACACACCT TACTGGCAGG ACATTCCCTG
GGTACCAATG CATGGCAATT CCGCTACTTT GGTGAATTCA CCGATGCGAT CGGCAACTCT
GATCTTACCA TTGCCGCGAA TGTAAAAGCG CCTAACAATA CAGTAAACTT CTTTGGTTTC
GGCAACGAAT CTGATTTTGA TAAATCACTG GGTATCCGGT ATTACCGTAC CCGTTTCAGC
CTGTATAATG TAGAGCCTTT ACTGAATACC AAACTGTCGC AGAACGTAGA ACTGTATTAC
GGTCCGTCCT TCACCTATTA CACACTGGAT AAGGATGAAA CTGTAGGCCG TATCACTGCA
GATTTCCCTA AAAACGGACT GGATTCTCTC TCTGTATTCC AGTCAAAAAC ATATGCTGGT
TTACGTTTAG GTTTAAAGAT TGATACCCGT GACAACAACC TGATCCCAAC AAGGGGTATC
AGCTGGAATA CTTCTGTGTA TGGTAGTCAG GGACTGAATG CACAGAACAA GAATTATCTG
CAGTTACAGA GTGACCTGAG TATTTATACT AATTTCCATG TACCGACCAG CGTCGTATTG
GTGACCCGTT TTGGTGCTAA TAAGATCTGG GGAGATTATG AATATTTCCA GGCAACTACC
CTGGGTGGTG TACAGAACCT GAGAGGTTAC CGTAATGCCC GTTTCAGTGG TAATGCTTCC
GTATACAATA ACATCGAGTT ACGTATCAAA TTATTTGACT TCCGTTCTTA TCTGTTCCCT
GCCAGTGTGG GTCTGATCGC GTTCAATGAC GTAGGTCGTG TATGGTACCA GAGCCAGAAA
TCAAGTGCAT GGCACGATGG TTATGGCGGA GGTATCTATT TTACCCCTGC TAACCTGGTG
GTATTGTCTG CGGTGGTAGG TCGTTCCGAA GAAGGTATAT TACCTTATAT TACTTTCGGA
TTCAGGTTCT GA
 
Protein sequence
MISILPKARH LLPLLFLPLL SQAQMTDDSL ARRIILIGDA GELHKDGHNP VIDAVKQRIN 
LQDARNTVLF LGDNVYPLGL PDAGAARYDE ARQILDYQVG LVKNTATQAI FIPGNHDWKR
SKPDGWQTVI NQQLYIDSLQ LPNVNFLPKD GCPGPEEVHL DNNTTLIIMD TEWWLFPYQK
PGSESSCDTK TREEVLAEVS DIVSRNRNKL IIFAAHHPFR SYSVHGGYYT IKQHIFPFTD
LKKNLYIPLP LIGSIYPITR GVFGTPEDIP NPVYQSMIRG IEAAIKPHGP AIFVSGHDHT
LQLINDDQNF YVVSGSGAKE NRVKKGSKSL YASNENGYTV LEISKSGHVE VKYYTIDKTD
GPSYAQQLFS LQDVRSSTIA NTSPSASQLP PTVSMAADSQ YINKTGFHYW LMGRNYRNVW
ATPMDLPVLD LNKEQGGMKI LKRGGGMQTM SLRLEDKKGT EWVLRSLKKY PAKAVPEALR
ETIAKDVVQD QISAANPYAP MAVGTLADAA GVHHTNPRFV YLPKDTVLGV YANTYGDDVY
LFEEREPDVK GKTLNTPKLL EQIQGDNDNT VNQAAVLNAR LLDWLMADWD RHDDQWRWGA
EKSKKAKTQV YFPIPRDRDQ AFFVNEGFLP RVASRKWALP NIQGFRPKIR YIEGQNPTAQ
PFDRSFMNEL SEQEWKDISH AFVLRMTDTV IRNAVNQFPD NIRSQVGERV YTTLKARRDI
LEKEALQFYS FISKHVEIVG TKKDELFTIE RQPEGKIDVA VTKINKKGEL EQTIYHRLFD
PKDTREIRIF GLGGEDKYVV KGDNGSPIRI RVIGGRNVDT YVDSTGSHAG KRIRIYDLAN
RKDSFDMHGN DRRILSSNPD NIRYERTFFR YQYNKLMPLA SAAFNQDDGL SLGAGFQYTT
QGFRKRPFAT RHTLLAGHSL GTNAWQFRYF GEFTDAIGNS DLTIAANVKA PNNTVNFFGF
GNESDFDKSL GIRYYRTRFS LYNVEPLLNT KLSQNVELYY GPSFTYYTLD KDETVGRITA
DFPKNGLDSL SVFQSKTYAG LRLGLKIDTR DNNLIPTRGI SWNTSVYGSQ GLNAQNKNYL
QLQSDLSIYT NFHVPTSVVL VTRFGANKIW GDYEYFQATT LGGVQNLRGY RNARFSGNAS
VYNNIELRIK LFDFRSYLFP ASVGLIAFND VGRVWYQSQK SSAWHDGYGG GIYFTPANLV
VLSAVVGRSE EGILPYITFG FRF