Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1408 |
Symbol | |
ID | 8357528 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1678754 |
End bp | 1679179 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 644963567 |
Product | RNA-binding S4 domain protein |
Protein accession | YP_003121106 |
Protein GI | 256420453 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1188] Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 42 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGGCCT TATATATTAT AGTCAATAAG ATGAAAGAAG TAGAAAAAGT AAGGCTCGAT AAATATCTCT GGTCCATCAG GATCTTCAAA TCCCGTTCCC TGGCCTCTGC CGGTTGTGAA GCTGGTAGGG TGAAAATGAA CGGTGTGACA GTCAAAGCGG CCAGAAACGT GGCCCTAAAC GATGTATATG AGATCCGGAC AGAAGGCCGT AAATGGGTGA TCCAGGTGAC CGCCCTGCTG GCCAACCGTG TACAGTACAC AGAAGCAATT AAGTTCTATA ACGATATCAC CCCCGAGGAA GATAAAGCAC AGGAACGTCA GGCTTCCGTA TTCCAGACCG GTAAACGCCC CAGCAAGATC GGTCGTCCGA CTAAGAAGGA ACGCCGGGAA CTGGACGATT TCATGGGTGG CGAGGAAGAT CTCTAA
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Protein sequence | MPALYIIVNK MKEVEKVRLD KYLWSIRIFK SRSLASAGCE AGRVKMNGVT VKAARNVALN DVYEIRTEGR KWVIQVTALL ANRVQYTEAI KFYNDITPEE DKAQERQASV FQTGKRPSKI GRPTKKERRE LDDFMGGEED L
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