Gene Cpin_1402 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1402 
Symbol 
ID8357522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1673557 
End bp1674012 
Gene Length456 bp 
Protein Length151 aa 
Translation table11 
GC content44% 
IMG OID644963561 
Productprotein of unknown function DUF477 
Protein accessionYP_003121100 
Protein GI256420447 
COG category[S] Function unknown 
COG ID[COG3762] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCATAT TCCCATTCAG TAAGAAAGAA TTACTAACAG AAGCTGAAAA GCAACAACTG 
GTGCAGGCTA TACGTGATTC GGAAAGACTC ACGAGTGGGG AGATCAGATT ATATGTGGAA
AGCCGTTGTA AATATGTCAG TCCCATGGAA CGCGCGAAGG AAATATTCCG GCAGCTCGGC
ATGGAAAAAA CCAAACGCAG AAATGGCGTT ATCCTGTACA TCGCTTTGAA AGACCGTCAG
TTTGCCATCC TGGGCGACAG AGGTATACAC GAAAAAGTAG GCTCCGCATT CTGGGTAAAA
GAAGCAGAAC TACTGGTCAG CTACTTCACC AGGAACGAAT ATGTTGCGGG TATTGATGCA
TGTATCAGGG AAATAGGCGA ATCGCTTTGC CAACATTTTC CTTTTGAAGG GGATGATGAA
AATGAATTAC CAGACGATAT AGTGATCGGC AGATAA
 
Protein sequence
MSIFPFSKKE LLTEAEKQQL VQAIRDSERL TSGEIRLYVE SRCKYVSPME RAKEIFRQLG 
MEKTKRRNGV ILYIALKDRQ FAILGDRGIH EKVGSAFWVK EAELLVSYFT RNEYVAGIDA
CIREIGESLC QHFPFEGDDE NELPDDIVIG R