Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1402 |
Symbol | |
ID | 8357522 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1673557 |
End bp | 1674012 |
Gene Length | 456 bp |
Protein Length | 151 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644963561 |
Product | protein of unknown function DUF477 |
Protein accession | YP_003121100 |
Protein GI | 256420447 |
COG category | [S] Function unknown |
COG ID | [COG3762] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 48 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCATAT TCCCATTCAG TAAGAAAGAA TTACTAACAG AAGCTGAAAA GCAACAACTG GTGCAGGCTA TACGTGATTC GGAAAGACTC ACGAGTGGGG AGATCAGATT ATATGTGGAA AGCCGTTGTA AATATGTCAG TCCCATGGAA CGCGCGAAGG AAATATTCCG GCAGCTCGGC ATGGAAAAAA CCAAACGCAG AAATGGCGTT ATCCTGTACA TCGCTTTGAA AGACCGTCAG TTTGCCATCC TGGGCGACAG AGGTATACAC GAAAAAGTAG GCTCCGCATT CTGGGTAAAA GAAGCAGAAC TACTGGTCAG CTACTTCACC AGGAACGAAT ATGTTGCGGG TATTGATGCA TGTATCAGGG AAATAGGCGA ATCGCTTTGC CAACATTTTC CTTTTGAAGG GGATGATGAA AATGAATTAC CAGACGATAT AGTGATCGGC AGATAA
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Protein sequence | MSIFPFSKKE LLTEAEKQQL VQAIRDSERL TSGEIRLYVE SRCKYVSPME RAKEIFRQLG MEKTKRRNGV ILYIALKDRQ FAILGDRGIH EKVGSAFWVK EAELLVSYFT RNEYVAGIDA CIREIGESLC QHFPFEGDDE NELPDDIVIG R
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