| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1400 |
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| Symbol | |
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| ID | 8357520 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1669511 |
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| End bp | 1672666 |
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| Gene Length | 3156 bp |
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| Protein Length | 1051 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963559 |
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| Product | signal transduction histidine kinase, LytS |
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| Protein accession | YP_003121098 |
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| Protein GI | 256420445 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3275] Putative regulator of cell autolysis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGACGAAGC TGTACTTATC GAAATATCTG TATGTTTCAG CCGTATTGAT CTGGCTGATG
ATATGGCCTT GTGCACAAGG CCGCGCACAG GGATCTTCTT ATACATTCTC TCACCTTGAC
AGAACCGACG GACTGGCCAG CAATCACGTA TCAGCGATCA TGCAGGATAG TAAAGGCTTT
ATCTGGATCG CCAGTACCGC CCTGCAACGC TATGACGGGA TCAATCTCGT CACCATCGCC
AGCTTCGATA AAGTGCCCGG CTCTATCTAT TATGACGATA TCTGCCTTTG TGAAGATAAT
AAAGGCCGTA TCTGGATGGG CGCTCCTGAC AATATCCGCT ATTACGATCC GGCTACTGCT
ACCGTCTCCG TATTAAAGAT CGATATCCCG CCCTCCATAC ACGGCAGCCT CAGTTGCAGC
CGTATCATAC AAGACCACGC TGGCGCCATA TGGGCTACCA CCCAGGAAGG ATTATTGCAA
TATGATGATG TGCGAAACCG CTTTGTAAAG CCTGCTAATA TTCCGGAAAC CATCAGAAGA
GACTTATATA GCACCATTGT AGAAGATAAG AAAGGCAACC TCTGGATCAG TGGTCGCAGT
GGTGTGTATA AGTTCGACCC CTCCCGTAAA CATCTTTATT ACGCTGATAA TAACCCGGAA
CATGATCCGC TGCTGGCCAT CAGAACCAGT GTGAAACGTT TTTATATCGA TCGGCAGCAA
CGCATATGGG TGGCTGCCAG GGGAGGCGAC TCCCTCTATC AATACTATCC GGACACCCGG
GAAATGCATA CCTTCTCTTT TTCCATGCCC TTTTCGAATG GGAATATGGT AACGGATATC
ATTGCAGACC GTGATCTGAA CATATGGGTA GCTACGGAAA ATGGCGGTAT CTACCGCTTT
AATGAGCCTG CCGGTAAGTT TGACATCAAT ATCCGGGCGA ATAACGAAGA CGACCAGGAC
CTGTACTACG ATTTTGAGGT GAACTGCTTC CTGAGTGACC GTAACGGCCG CTTATGGGTA
GGCACCGATC TGGGGGTGAA TATCCTGAGT ATACCGGACA ATTCCTTCCG GATCATGGAC
CATCGCACCG TCTTCAAAGG CTCAGAAGCC CGCCTGCCCA AAACAGAAGT AACAGGTCTT
TTCCAGGATA GCCATGGGAA TATTTATGCC GGTTACTGGG GGAGAGGCTT TTGCTGGCTG
AATCCCTCGC TGGAATTATT AGGGCAATAC CTGCATGATG CGAAAAGTCC TGCCTATCAA
TTGCCGGAGG AACGAAGTCT CGTCTGGAGT TTTGCGGAAA TGAAGAATGG GACGGTACTG
ATCGGACAGG AAAATGGCAA CTTGTCCATA TTTGACCCGA CCAAAGGGAA ATTTCTGAAG
CATTACCAGC CCAACGTTTT TGGTGACCAG ACCCTGATGA CCATGCTACC GGAAGGGGAT
ACGGCTGTCT GGATCGGTCT GTACAAAAGG GGACTTGTAC GCTGGGATAC CCGTACAGAC
GCTTTTATTG CTTATCCCGC TTTACTGGAA TATGTCAACC GGCCTATAAC GATTATGGAC
ATCGCCCGGC GTTCTGACTC CCTGCTGTGG ATTTCCACCA GCGATGCAGG ACTGATCCGC
TTTAATACCC AGAAAGGAAG CGTGAGTGCC TCAAAATTAT TCCTGCACGA TAAACTGACC
GTCAGCAATA TCACCTGTAT AGAATTCCTG GATGACAGCA CACTGATTGC CGGAACAGAT
CATGGACTCT GGGTTTACAA TACCTTCAGT AATGTAGCCC GTCCACTGAT GATCAATGGT
GCCTTGTTTG ACGAATGGGT ACTCAATCTG CAGGTAAATG GCTCCGTAGG TACCTGGTTT
AGCACCCAGT ATGGATTCTA TTATTTCAAT AAACAACAGG GATCAATCGA GACATTCGTA
CAGAGTGGCG ATATCATAGA CAATAACAGG AAAGTACGCA GGACAGTCAG TATGCTGCAT
GATGGCCGCT TAATGGTCGG CGCTTCTGAT CATTTTGTCA TCTTTGATCC GGCTGCATTA
CAGGTAGCGC CACCGCCGCC TGATGTGACG ATCCTTGGTT TCCGGGCAAT GGATAGTGTG
ATCCATATAG GAGTGGAGAG AGGAAAGTAT GCGCCGGTAA CATTGACGCA CCGGCAGAAC
TTTATCAGTA TAGAGTTTAA AAGTCTGCTG TATCACCATG AACCTGTAGG TTATCTGTAC
CAGCTGGAAG GCGTCGATGA AGAATGGGTA AAAGCAGGGG GGCTGCTGGT AGCAAGATAT
ACCAACCTGC CACCGGGTAG TTATCTGTTC AAAGTACGCA GTGTGGATCC TGCGGGTACT
TTTTCATCGG GCGTGACCAC CATTACCGTG AATATCTTAC CGGCCTTCTG GCAAACGTCG
TTGTTTAGAA TATGCTGTGT ATTACTGATT ATAGTATTAA TCTACGTTTA CTTCAAACTG
CGTGTAAATG CGGTAAAGAA GGAAGCCCGC AGACGTACGG CTATTCAGCA GCAGATCGCG
CAGCTGGAGA TGAAGGCGCT CCGTGCACAG ATGAACCCTC ACTTTATTTT CAATGCGCTG
AATTCCATTC AGACATTTAT GATGAAGCGC GAAACGGAGC AGGCATTGTC TTATCTGGGA
CGTTTTGCAA GGCTGATCAG GAATGTACTG GACAATTCAC AGTTGAACAG TATCCCGATT
TCTAATGAAC TCCGTATGCT GGAAAACTAT CTGGAACTGG AGAAACTGCG TTTCGGAGAT
CAGTTCAGTT ATAAGATTAC GGTAGATGAT GAACTGGATC CCGACTTTAC AGATATTCCT
ACCATGATCT TACAGCCTTT TGTAGAGAAT GCGATCTGGC ATGGATTGCT GCATAAGAAA
GAAGACGGTC ACCTGTCCAT TGCTTTTCAC CAGCAGAATG GAAGTCTGTT ATGTGTGATA
GAAGATAACG GGGTAGGAAG AGAAAGAGCA GTGGCACAAC GTCAGCAGGG GAATGAGCAT
CATTCCCGTG GATTGCAGAT CACGAGGGAC AGGCTGGCCT TATACAACAG ACGTTTCAAC
CTGGATGCTA CTTTTGATAT AGAAGATTTG TATGACGACG CAGGACAACC AAGCGGCACA
CGTGTCAATG TCTGGTTCCC GCTGAGTGAA GTATAA
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| Protein sequence | MTKLYLSKYL YVSAVLIWLM IWPCAQGRAQ GSSYTFSHLD RTDGLASNHV SAIMQDSKGF
IWIASTALQR YDGINLVTIA SFDKVPGSIY YDDICLCEDN KGRIWMGAPD NIRYYDPATA
TVSVLKIDIP PSIHGSLSCS RIIQDHAGAI WATTQEGLLQ YDDVRNRFVK PANIPETIRR
DLYSTIVEDK KGNLWISGRS GVYKFDPSRK HLYYADNNPE HDPLLAIRTS VKRFYIDRQQ
RIWVAARGGD SLYQYYPDTR EMHTFSFSMP FSNGNMVTDI IADRDLNIWV ATENGGIYRF
NEPAGKFDIN IRANNEDDQD LYYDFEVNCF LSDRNGRLWV GTDLGVNILS IPDNSFRIMD
HRTVFKGSEA RLPKTEVTGL FQDSHGNIYA GYWGRGFCWL NPSLELLGQY LHDAKSPAYQ
LPEERSLVWS FAEMKNGTVL IGQENGNLSI FDPTKGKFLK HYQPNVFGDQ TLMTMLPEGD
TAVWIGLYKR GLVRWDTRTD AFIAYPALLE YVNRPITIMD IARRSDSLLW ISTSDAGLIR
FNTQKGSVSA SKLFLHDKLT VSNITCIEFL DDSTLIAGTD HGLWVYNTFS NVARPLMING
ALFDEWVLNL QVNGSVGTWF STQYGFYYFN KQQGSIETFV QSGDIIDNNR KVRRTVSMLH
DGRLMVGASD HFVIFDPAAL QVAPPPPDVT ILGFRAMDSV IHIGVERGKY APVTLTHRQN
FISIEFKSLL YHHEPVGYLY QLEGVDEEWV KAGGLLVARY TNLPPGSYLF KVRSVDPAGT
FSSGVTTITV NILPAFWQTS LFRICCVLLI IVLIYVYFKL RVNAVKKEAR RRTAIQQQIA
QLEMKALRAQ MNPHFIFNAL NSIQTFMMKR ETEQALSYLG RFARLIRNVL DNSQLNSIPI
SNELRMLENY LELEKLRFGD QFSYKITVDD ELDPDFTDIP TMILQPFVEN AIWHGLLHKK
EDGHLSIAFH QQNGSLLCVI EDNGVGRERA VAQRQQGNEH HSRGLQITRD RLALYNRRFN
LDATFDIEDL YDDAGQPSGT RVNVWFPLSE V
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