Gene Cpin_1388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1388 
Symbol 
ID8357507 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1651551 
End bp1652411 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content46% 
IMG OID644963546 
Productaldo/keto reductase 
Protein accessionYP_003121086 
Protein GI256420433 
COG category[C] Energy production and conversion 
COG ID[COG0667] Predicted oxidoreductases (related to aryl-alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones51 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGACAT CATCAAGTTT TAAACCGACC TTTTTATTAG GTGGCGATAT AGAGATCAAT 
CGTATGGGCT ATGGAGCTAT GCGTATTACC GGCCCAAAGA TCTGGGGGAT GCCTGAAAAT
CCGCAGAACT CAATAGATGT TCTACAACGA GCTGTTGAAT TAGGCGTAAA CTTTATTGAT
ACAGCCGATC AGTACGGCCC ATTTACCTCC GAGCAATTAA TTGCAGATGC GTTATATCCT
TATAAGGATA ATGTCATTGT AGGCACCAAA GGCGGCCTTG TACGCTTTGG CCCCTGGGCA
GATATTAATA ACGACGCCAG TCCACAGCAC TTACAGGATG CACTTGACGG CAGTCTGCGC
AGACTTAAAC TGGAACAGAT AGCACTTTAT CAATTACACC GCATCGATCC TAAAGTTCCG
GCAGAAATCA GCTTTGATTT CCTGGCGAAA GCACAGCAAC AAGGCAAAAT AAGACACCTG
GGCTTATCTG AGGTATCTGT AGAGGATATT AAACTCGCGC AAAAACACTT TAAGGTCGTT
TCAGTGCAGA ACCGCTATAG CGTACTGGAT CGTCAATGGG AGTCCGTACT GGAATATTGC
AAATCTGAAA ACATCGCCTT CATTCCCTGG TTCCCGATAG GCGGCGGCAT GGTGCAGTTA
GAAGAAAAGC TCCAGGAAAT AGCTACCCGT AAGCAAGTGA CCATGCATCA GCTGGCATTG
GCCTGGTTAT TACATCGTGC AGATAATATT CTGTTGATAC CTGGTACTTC CAGCGTGGCT
CACCTGGAGG AGAATATAAA GGCGGCGACT ATTGAACTGA CTGCCGATGA TATAAAGGAG
CTGAATGGAC TGGTGCAGTA A
 
Protein sequence
METSSSFKPT FLLGGDIEIN RMGYGAMRIT GPKIWGMPEN PQNSIDVLQR AVELGVNFID 
TADQYGPFTS EQLIADALYP YKDNVIVGTK GGLVRFGPWA DINNDASPQH LQDALDGSLR
RLKLEQIALY QLHRIDPKVP AEISFDFLAK AQQQGKIRHL GLSEVSVEDI KLAQKHFKVV
SVQNRYSVLD RQWESVLEYC KSENIAFIPW FPIGGGMVQL EEKLQEIATR KQVTMHQLAL
AWLLHRADNI LLIPGTSSVA HLEENIKAAT IELTADDIKE LNGLVQ