Gene Cpin_1370 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1370 
Symbol 
ID8357489 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1637450 
End bp1638292 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content47% 
IMG OID644963528 
Productdienelactone hydrolase 
Protein accessionYP_003121068 
Protein GI256420415 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG0412] Dienelactone hydrolase and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.591445 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones48 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGATTCA ACATTGCAAC AATGATCGCT CCCGCAGCAC TTGCATTCTG CATGGCTGCA 
TGTAACAATC AGCAGGCAGG TGCAGAACAT ACTGCTGACA GCACCGTTAC CAAACCAACA
ATTACAGAAG AAGCTGTTAC TATCCAGGCT GACAGCGTTA CCCTTAACAG CATTGTCGCT
TTCAGCAGCG ATACTACCGT TAAAAAACCA ATTGTACTGA TCGTACCTGA GTGGTGGGGA
TTGGATGATT ACGTAAAAGG CCGTGCTAAA CAACTGGCTG AGCTGGGCTA CCTAGCAATC
GGTATTGATT TTTATGGTGG TGGAAAACAT GCAGAAAACC CTGACCAGGC TAAAGCATAC
GCTACCCCAT TTTATATGAA CCCACAGCTG GGTTTCAGCA GATTACAGGC AGCGCTGGCA
AAGGCAAAAA CCTTCCCACA GGCTGATACT ACCCGTATTG CTGCGATCGG TTATTGCTTC
GGTGGTTCTA TGGTTCTGAA TGGCGCGAAA CTGGGTCTTC CGGTAAATGG CGTAGTGAGC
TTCCATGGTG GTCTGCAGAC CGTTCCTCCA CAGCAGGGAC TGACAAAAGC GCAGATCCTG
GTATGTCATG GCGCAGCTGA TCCATTTGTA CCAGCTCAGG ACGTAGCTAC TTTCAAAAAA
CAACTGGATT CCCTGAGCAT CCCTTATACA TTTAAGGAAT ATGCAGGTGC TACCCATGCA
TTTACCAACC CTGCGTCTAC TGCTAACGGC AAGAAATTCA ATATGCCTAT TGAATACAAT
GCTGCTGCTG ATACCGCTTC CTGGAATGAC ATGCGTACCT TCTTTGGAGT AATCTTTAAA
TAA
 
Protein sequence
MRFNIATMIA PAALAFCMAA CNNQQAGAEH TADSTVTKPT ITEEAVTIQA DSVTLNSIVA 
FSSDTTVKKP IVLIVPEWWG LDDYVKGRAK QLAELGYLAI GIDFYGGGKH AENPDQAKAY
ATPFYMNPQL GFSRLQAALA KAKTFPQADT TRIAAIGYCF GGSMVLNGAK LGLPVNGVVS
FHGGLQTVPP QQGLTKAQIL VCHGAADPFV PAQDVATFKK QLDSLSIPYT FKEYAGATHA
FTNPASTANG KKFNMPIEYN AAADTASWND MRTFFGVIFK