Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1363 |
Symbol | |
ID | 8357481 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1629371 |
End bp | 1630906 |
Gene Length | 1536 bp |
Protein Length | 511 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963520 |
Product | glucose-methanol-choline oxidoreductase |
Protein accession | YP_003121061 |
Protein GI | 256420408 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGCT ACGATGTTAT TATCATTGGC AGTGGTTTTG GAGGCTCGAT GGCTGCTAAA CCACTCGTTG ATGCCGGGAT GAAAGTGCTC ATGCTGGAGC GCGGTGACTG GGTAAAGCGC AGTGTTGAAG AAAACTGGGG GCCAAAGGGT TCTATTGATC TTTCTCCTTT TTATGATAAA TCTTCCCTGT TGCATGTGCC CGTTGGCGGT AATAAACCAA CCATGGGCTT GTATTCCTGC GTAGGCGGAC CATCGGCTTT TTATGGCGGT GTATCTTTTC GTTTTCGCGA GGCCGACTTT GAAAAGAATG AGCAAATCGA GGGTAAGGAT GCGCAAGGCT GGCCCATTAC ATATGACGAC CTGGAAAGCT ATTACACACA AGCCGAGGGC ATATTAAACA TATCGGGCGA AACGGATATT GATCCAACCG AACCACGCCG CAGTGCGCCA TTGCCGCAAC ATGCACCTGC TTTGGCCAAT ATATCCCAAA AGGTGAAATC CAGCGCGCAA AAATTAGGGC TGCATCCTTT TCAGCTGCCT TTGGCGATTA ATTACGAAGA TACAAGCCGC CAAACCTGTC TTAGCTGCAA GACCTGCGAT ACTTTTGCCT GTGCCGTAAG CGCGAAGAAC GACCTGGCTA CCATCCTGAT CCCTCAGCTG ACGGCAAACG GTATGGAGCT ACAGCACAAT ATGGTAGTGA CAAGATTAAA CGTACTAAAT CGTCGTATTG TAAGCATCGA GTGCGTATCG AAAACATCCA AACAGTCGTA TACATTTAAG GCCGATAAAT TTATACTGGC TGCCGGTGCA TTAGGTACAC CGCATATCCT GTTATCATCG GGTCTGCAAC ACTACAACCC CGGCGGCGAT GTAGTGGGCC GCTACCTGAT GCGGCATTTA AATGCTATCA TATTTGGTAT TTTCCCCGGC GTTGCCGATA AGGAAGGCCG TTTTCATAAA CAGCTGGCTA TACTGGATTA TTATTTTGGT CACCCCCAAG CCCCCGGATT TAATAAACTG GGTAGTTTAC AGCAAATGCC AACCCCTCCC GCAAGTGTAG TTGAAAATGA ATTAAAGGGC GTATTAGGGA AGGTACTTAG TCCGGCGGTA AAGTTATTAA GTGGCTTGCT GGCCATTGTT GAAGACCAAC CGCAATACAA TAATGCGCTA ACGATTGATG CCGCTTTTTC CGATGAATTT GGTTTGCCCC GAGTTGTTAT CAACCACAGC TATAGCGACA GGGATAACGC CGCAATGAAA ATTTTAACCG AAGAGGGTAA AAAGATCATG AAAGGGGCGG GGGCGCTCAC CCATTATATA CATAATATTC GTACGTTTTC ACACGCGGTG GGTACAGTAC GTATGGGTTT GAACGAGAAG ACATCAGCCC TTGACGAGCA TTGCCATTTC AGGGGAATAG ATAATTTATA TGTTACCGAT GGTAGCGTAA TGCCAACATC GGCAGCGTTA AACCCAAGCC TAACCATTGC CGCAAATGCA CTACGGGTAG GCGAATTTAT TACCAGATTA AATTGA
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Protein sequence | MNSYDVIIIG SGFGGSMAAK PLVDAGMKVL MLERGDWVKR SVEENWGPKG SIDLSPFYDK SSLLHVPVGG NKPTMGLYSC VGGPSAFYGG VSFRFREADF EKNEQIEGKD AQGWPITYDD LESYYTQAEG ILNISGETDI DPTEPRRSAP LPQHAPALAN ISQKVKSSAQ KLGLHPFQLP LAINYEDTSR QTCLSCKTCD TFACAVSAKN DLATILIPQL TANGMELQHN MVVTRLNVLN RRIVSIECVS KTSKQSYTFK ADKFILAAGA LGTPHILLSS GLQHYNPGGD VVGRYLMRHL NAIIFGIFPG VADKEGRFHK QLAILDYYFG HPQAPGFNKL GSLQQMPTPP ASVVENELKG VLGKVLSPAV KLLSGLLAIV EDQPQYNNAL TIDAAFSDEF GLPRVVINHS YSDRDNAAMK ILTEEGKKIM KGAGALTHYI HNIRTFSHAV GTVRMGLNEK TSALDEHCHF RGIDNLYVTD GSVMPTSAAL NPSLTIAANA LRVGEFITRL N
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