Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1357 |
Symbol | |
ID | 8357475 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1625338 |
End bp | 1626267 |
Gene Length | 930 bp |
Protein Length | 309 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963515 |
Product | ABC transporter related |
Protein accession | YP_003121056 |
Protein GI | 256420403 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGACAAT ACATCGTAAG AACAGCTCAT TTATATCACA GATATAACAG GCAATGGGCT ATACAGGATA TTAATATTTC TATCGGTCAT ACCGGCGTAC TGGGACTGTT AGGTTCAAAT GGTGCGGGAA AATCCACCAC CATGAACATC TTATGCGGCG TACTGAACCA GACAACGGGG AAAGTCTATA TAGATGATAC CGATCTGCAG GAGTACCCGG AAAAGGCTAA AAGATTGCTG GGGTTCCTCC CTCAACACGC ACCACTACAT CTGGACCTGA CAGTGGACGA ATACCTTACC TATTGCGCAC ATATCAGGGA TATTCCTGCA AAAGCAGTTA AATCGGCCGT GGCAGCTGTA AAAGATAAAT GCGGCGTCAC AGCTTTCGGT AAACGTCTGC TGAGTAATCT TTCCGGTGGT TACCGGCAGC GGGTAGGCAT CGCTCAGGCC ATCATTCACA AGCCCAAACT TGTTGTACTC GATGAACCTA CCAACGGACT TGATCCTATT CAGATCAAGG AAGTACGTCA TCTGATAAGA GAGATTGCAG AAGAACGGGC AGTCATTTTC TCCTCTCATA TTCTGTCTGA AGTGCAGGCT ACCTGTAATG AAATCCGCAT GATAGAAGGC GGGCAGATCG TATTTTCCGA TACTATGGAG GCATTTAATA ATTACATTCT ACCTAACTCC ATGATCGTTG CGATGGACAA TCCCCCTGCA ATGGAAGAAC TGGCCATCAT ACCAGGCGTC AATAAGGTGG AACTACTGCA CGACCAGCGG ATCCGTATAC ATTTCAGCGG TTCCTCCACT ATCTCTCAGC AGATCGTACA TATGAGTGTC GCACACGACT GGCAGCTCAA TGAAGTAACA CCCGAAAAAA GCTCACTGGA CGAAATATTT GCTCAGCTCT CTAACCGGAA TTTTAAATGA
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Protein sequence | MGQYIVRTAH LYHRYNRQWA IQDINISIGH TGVLGLLGSN GAGKSTTMNI LCGVLNQTTG KVYIDDTDLQ EYPEKAKRLL GFLPQHAPLH LDLTVDEYLT YCAHIRDIPA KAVKSAVAAV KDKCGVTAFG KRLLSNLSGG YRQRVGIAQA IIHKPKLVVL DEPTNGLDPI QIKEVRHLIR EIAEERAVIF SSHILSEVQA TCNEIRMIEG GQIVFSDTME AFNNYILPNS MIVAMDNPPA MEELAIIPGV NKVELLHDQR IRIHFSGSST ISQQIVHMSV AHDWQLNEVT PEKSSLDEIF AQLSNRNFK
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