Gene Cpin_1356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1356 
Symbol 
ID8357474 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1623095 
End bp1625341 
Gene Length2247 bp 
Protein Length748 aa 
Translation table11 
GC content46% 
IMG OID644963514 
ProductABC-type transport system involved in multi-copper enzyme maturation permease component 
Protein accessionYP_003121055 
Protein GI256420402 
COG category[R] General function prediction only 
COG ID[COG1277] ABC-type transport system involved in multi-copper enzyme maturation, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TATTAAAAAT AGCAAAACTG GAGTTGAGTA TCCTCTTTTA TGCGCCTGTA 
GCCTGGCTGG TACTCGTTAT TTTCATGGTA CAGTGCAGTA TGCACTTTTT CAATCTGTAC
CAGGGCATAC GGGAAGGTCT ATCCGCCGGT ATCAATATCA ATAATATTAC CTACGCCGTT
TTTCCGGATC AACCCGGATT ATTCACAGAA GTACTGCAGC ACCTTTATCT CTATATTCCG
CTGCTCACCA TGGGCCTCAT GAGCCGTGAA ACCAGCAGTG GCTCTATAAA ACTATTACTC
TCCTCTCCGG TGAAAATACG GGAGATCATA CTGGGAAAAT ATCTGGCTAT CGCCGTTTAC
AGTCTGCTAC TGATGCTCAT TCTTTGCATC TATGCTGTCA TCGCTGTGCT GACTATCAAA
GATGCAGACA CCGGCCTGAT TATCTCCGGA TTAACCGGAT TATTTCTGCT GACGGCCACC
TATGCGGCGA TCGGACTTTT TATGTCCAGT CTGACGTCTT ATCAGGTGGT AGCTGCTATC
AGCACCCTGG CTGTATTTGC CGGACTCAGA TTTATCGGAT CTGTGGGTCA GGAAACTGAC
TTTCTCCGCG ACCTCACCTA TTTCCTCTCT ATCTCAGGAC GAGCCGACGA GATGCTGAAA
GGACTAATCA GTACAAAAGA TGTCATTTAT TTTCTGCTGA TCATCCTTTT ATTCCTGTCC
CTCTGTATCA TGCGCCTGCA AAATGACAGG AAACATGATT CTCTGCCAGT ACAATCAGGT
AAATATCTAG CCCTGTGCGC AGTCATACTT TTCGCTGGCT ATCTCAGTGC AAGACCTTCT
CTTACCGCAT ACCTCGATAT GACAGCTACC AAAAAACGTA CGCTTACGCT GGAAAGCCAG
GCCATCGTCA AACAGGTACA GGGGCCACTG AAAATAACGA CCTACGTAAA TCTTCTGGAT
GATAACGTAT ATTTCGGATT ACCGGCAGCC AGGAACACTG ACCTCCAGCG ATTTGAACAA
TTCAGGAGAT TTATTCCCGG CATGACATTC GACTATGTGT ATTACTATGA TGATCCGGTA
AAAGAAGATT ATGAAGCAGG AATGACCAGC TATCAGCTCG ATCTGAATGG CTTGAATACA
CAGCAGAAAG CAGAGAAAGT GGCAGAAAAT ATGGGATTGG ATATGGGGAT GTTCCTGCCT
CCTGCTGAGA TCCGGAAACG AACCAACCTG GCGCCAGAGA ACAATAACAT TATACGAACC
GTTGAATATA AAGGCCGGAC AAGCATACTC AGACTATACA ATGGATTCGA CCAGTTTCCC
TCTGAAAGGG AAATCAGCAC GGCCATCAAA CAACTACTGA TACCCGCACA AAAAGTAGTA
TTTGTAAGCG GAGACAATGA AAGAAGCATC AAGAAAAAGG GGGATAGGAA TTATCATATG
ATGGCTACGA TGAAACGGAA CAGAATTGCA CTGGTCAACC AGGGATTTGA TGTCATGGAA
ACAGATCTTC ACACACAGGA AATACCTGAC AGTCTGAGCG TACTGGTCAT AGGAGATCCT
GCCATCCAAC CGGATAGTAC TGAAATGCGT AAGCTCACTG CTTATATTAA CCAGGGCGGG
AATCTGCTGA TCACCGGTGA ACCAGGCAGA CAATCACTAC TGAATCCGCT ACTGGCACAA
TTGGATATCA GTATGAAAGA AGGTATACTG GTGAGACCGA GCAAAGATGA CGCTCCGGAC
CTGATCTATG GTCAGCTGGA TGCACGAACA GCTGTTGCCA TGGAAAGCGC TGCCGCCATT
ACGTATACTG ACCGCGGCAG GTTTAAAACG GATACGGTTG TCATGAGTGG CCCAACCGGA
TGGAATACAC TTACAAACGT AGACCCGTCT GGCACACTGA TCTATCAGGC CGGCGATGAG
AAGGGGCGCT TCCCTATCGT ATTGGCGCTG ACGAGAACAA TAAATAATAA AGAACAGCGA
ATTATGGTAT CGGGCGATGC TGATTTCATG AGCAATGCAG CACTGGATCA TCCTAAAGGA
GCGAACCAGC TGCTTGTGAA TAATATCTTT CAATGGTTCA GTAACGGCGC ATTTCCACTT
GAAATAGGCA GACCTGTTAT GACAGATGAT CAGCTTTCGG TGAACAGAAA ACAGATCTCC
AAACTGAAAC TGGTCTTCCT CGGTATCATA CCTGCCCTGC TGATCGCAAT CGCCGCCATT
ATTCTCATCA GAAGAAAAAG AAACTGA
 
Protein sequence
MKKILKIAKL ELSILFYAPV AWLVLVIFMV QCSMHFFNLY QGIREGLSAG ININNITYAV 
FPDQPGLFTE VLQHLYLYIP LLTMGLMSRE TSSGSIKLLL SSPVKIREII LGKYLAIAVY
SLLLMLILCI YAVIAVLTIK DADTGLIISG LTGLFLLTAT YAAIGLFMSS LTSYQVVAAI
STLAVFAGLR FIGSVGQETD FLRDLTYFLS ISGRADEMLK GLISTKDVIY FLLIILLFLS
LCIMRLQNDR KHDSLPVQSG KYLALCAVIL FAGYLSARPS LTAYLDMTAT KKRTLTLESQ
AIVKQVQGPL KITTYVNLLD DNVYFGLPAA RNTDLQRFEQ FRRFIPGMTF DYVYYYDDPV
KEDYEAGMTS YQLDLNGLNT QQKAEKVAEN MGLDMGMFLP PAEIRKRTNL APENNNIIRT
VEYKGRTSIL RLYNGFDQFP SEREISTAIK QLLIPAQKVV FVSGDNERSI KKKGDRNYHM
MATMKRNRIA LVNQGFDVME TDLHTQEIPD SLSVLVIGDP AIQPDSTEMR KLTAYINQGG
NLLITGEPGR QSLLNPLLAQ LDISMKEGIL VRPSKDDAPD LIYGQLDART AVAMESAAAI
TYTDRGRFKT DTVVMSGPTG WNTLTNVDPS GTLIYQAGDE KGRFPIVLAL TRTINNKEQR
IMVSGDADFM SNAALDHPKG ANQLLVNNIF QWFSNGAFPL EIGRPVMTDD QLSVNRKQIS
KLKLVFLGII PALLIAIAAI ILIRRKRN