| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1354 |
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| Symbol | |
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| ID | 8357472 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1618219 |
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| End bp | 1621911 |
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| Gene Length | 3693 bp |
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| Protein Length | 1230 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963512 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003121053 |
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| Protein GI | 256420400 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.173516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 39 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATCGAA ATTATGCCAT CAAAATTGGC GTGCCGGTGA GGCATGTCCA GCAACTATTG
CGAATAATGA AATTATCAAC CATCCTCTTG CTGGTAGGTT TCATGCAGGT AAGTGCAGCT
GTATATGCAC AAAAGATCAC CTTATCGGAG CGCAATGCCG AGCTGAAACA ACTGTTCACA
AAAATACAGG AGCAGAGTGA CTACGATTTT GTTTATACCC GGCAACAGCT GCAAACGGCA
AAGCCGGTCA ATATCCATGT CGCCGGCATG GAGCTCAGCG ATGTATTACG CCTTATTTTC
AAAGATCAGC CTTTAACGTA TATTATCGAC GATAAGACAA TTGTTGTCAA AGACAGGGAT
ATCGTCTTCC CCCCTGAAGC GCCCGATCCT TTTGATATAC AGGGACAGGT ACTGAATGAA
AAAGGATTGC CTTTGCAGTC TGCCACCGTA AGGATAATTG GTACCCGGCA ACAGCAGTTG
ACCGACATTG ACGGAAAGTT TTTCTTTACA GATGTACTTA AGCAGGGAAA GTTCATTGTC
TCATATATTG GTTACCGGAC AGATACCATT GCCATCAGGG GGAAAACAAC ATTCATTATC
CAACTTGATC CACAGGCGAA AGCTATACAG GAGATCAGCA TTGTATCAAC CGGTTACCAG
GAGCTACCCA GAGAACGCGC TACCGGCTCA TTCGAAGTCG TATCTAAAGA ACAGCTGCAG
CATAGTACGG ATATCAATCT TGTCAGACGG CTGGAAGGGA TCACTAACTC AATGGATTTC
AGGAATGATC TACGTCCGGT CAATTCCAGC AACCCCAATG CACAACGCTC TCCACTGGCG
AATCTGACCA TCAGGGGAAA GAATACATTA AATGAATCTG TCAATGCCGA TCTGAATGGC
AACTATAGTG GTCAGCCGCT GGTAGTGATA GACGGTATCG CCAGCCCCTA TTCCATTGAT
AAGATCAATC CGAATGATGT AGAAAGCATT ACCATTCTCA AAGACGCAGC AGCAGCTTCT
ATATGGGGAT CACGGGCCGC AAACGGGGTA ATCGTTGTAA AGACCAAGCG CGGTGCATAC
AACCGGGCAC TCCGGGTATC ATTCAACAGC AATGTTGCTA CTTCCGGTAA AGTAGATCTG
TTCTATAACA AGACCATGTC TGTTTCTGAT CTGATAGACG CACAGATGTT ACAGTTCATC
AATGCCGACA GGTCTTTACC TTCTATCAGT ATCAGCAGCC TTTATGGTCA GGAGCCTGTT
TCACCGGTTG CGGAGATCAT GGATGCCTGG AAAAATAAAG GCACACTCAC TGAGGCAGCA
GCCATGGCAC AACTGGATGT GCTCAGACAA AACGATATCA GAAGAGATTA TACAAAATAC
TTCCTGCGCA ACCCTATCAC TCAAAGCTAT TCACTTGCCG TAGATGGAGG TACCGAACAC
TCCAACTACC GGCTATCTGC CGGTTATGAC AGAGGCATCA ACAATACACG CAATTCAAGC
CAGGATCATG TGGCACTGAC GCTCAACGCT GCTTTCCGTC CGCTGAAACA CCTGGAACTA
CAGGGTAACA TCGCTTATAA TGTGCAACAG AATAACGAAC AGGCTCCAGA TAACAGGATC
ACCGGTGTAT CCAGTGCCCC TTTTTATCCA TACAGCCGCC TGGCCGACGA TGAAGGTCGT
CCGCTGGAAC TGACGAAGAT GTACAGACCT GGTTTCGTAG AGATGTTTGA GAAAACATAC
CCCACACAGT TCCTGAGCTG GCGCTATACA CCCCTTGAAG ATATCAATGA GGGGTATAAC
AAATTAAAAG CACAAAGCCT TAATATGAAT TTCAGCGCTA ATTACAGGAT CGTGGAAGGA
CTGTCCCTTC AGGCTACCTA CAACTACAAC ACCGGCCGTA GTAATGATAA CACCCTGTAC
AGACAGCAGT CTTTTTTCAT GCGCAACCTG ATCAATTATT TCACTACTTC GCTCGCCTCT
GCTAACCCCA TGACGGGCGA TCCCGTCACT CCGTTTGTAA GACAGCTGCC ATTGGGAGGA
CAGTACAATA CCAGTCTGAC CCGGTCCAGC AATCAGACGA TGAGAGGACA GCTGAACTTT
GACAGGACAT GGAAGGCTAA ACACCAGATT TCTGCTATTG CCGGTCTGGA CGTGGCACAG
AACTACAGTA TCGTTACCAG CAATGGTTTC TACGGATACG ACGAAAATAC ACTGCAAAGC
AATAACCGCC TCGATTATAA GACCATGCTT CCTATTGTCT TCTCTGAAGA CTTCAGCGGC
TACAATGGCG AATATATTCC CAATCTTGAC GCAGGGTTTA TCGACAATAA AGTGAGAACT
TTCAGCTGGT ATACCAATAT GGCATATACC TTCGACAGTC GTTATACCTT ATCTGCCAGC
TTCCGGTCAG ATCTTTCCAG TGAATTCGGA CGCGGCACAA ACCGTAAAGG AGCGCCTTAT
TACTCTGTTG GCGGCGCATG GAATATCCAC CATGAGAAAT TCTATCATTC AACACTATTC
CCAACACTTA CGTTCAGAAC GACGTTTGGC TACAACGGTA ACGTAAACCC TTCTGTACTG
GCCCGCCCGC TTGTTACATA TTCTATTTTC GATGGCGTCA ACGGCCTGCC ATATGCATAT
ACCAGCTTTG GTACCGGTAT CACCAACAGT AAACTGCGTC CGGAGAAGAC AGGTATTCTG
AATATAGGTG TTGATTTCGC GATGAAAGGC AACCGTCTTT CGGGTAGCGT ACAATACTTT
ATCAAGAAAA CATCCGATCT GATTGCAGGT GGGGCATTAG ATCCGAGTAC AGGCTATACA
AACATCACTT ACAATACAGG CAACTTACTG GGCCATGGTA TTGACATATC CCTCAACTCG
CTGAATATTC AGCGGGGGAA ATTCAGATGG AACACCAATT TCCTCTTCAG CTATAACCGT
GTAAAAGTGA CAAAACTGTA TGCGACGGCA GCAAGTGCCG CCGGCCAGGT AGTATCCAAC
AGCTCCGGCT CTTACAATGA AGGCTACGAT CTTTCCCGCT TATTCGGATA CAGATGGGCA
GGACTGGACC CGGCAACCGG CGATCCACGT GGATATGCAG ATGGGCATAT TGTCACTATC
TCCAATACTC CTGACGGCAA CAGCGCCTAT AACAGTTTGC AGACCGCTCC TATTTCTTCA
TTAAGATATT TCGGTTCAGC AGTACCGGTA TGGTATGGTT CCCTGCGTAA TACCTTTAAT
TATGGCCCCT TCTCTGCAAC GGCAGGCATC CTGTACAAAA TGGGTTATTA TGTAAGAAGA
CCTCAATCGC AGGTATTAAA CTACAGTCAG CTGTATAGTA CCAACGCCAC AATACAGGGT
ATAGAGTACC AGGACAGGTG GAAACAAGCC GGAGATGAAT CACATACGAA TGTGCCATCT
GCTGTTTATA CCGCCACTAA TCAGAACCGC GATAACTTCT ATTATTACTC GGAGATAAAT
GTCCTGAAGG GCGATCATAT CCGCTTACAG GAGATTAATC TCTCCTACCT GATACCCGCT
GCCAAAAGCA AGTTTATCAG GAATCCAAGG ATATATGCCA ACATCAGTAA TCTGGGGATT
ATCTGGCGGG CCAATAACAA AGGGATCGAT CCGGAAGTAT TCGACTATCC CAATCCAAAG
TCCTACAGCC TTGGCTTTTC TGCAAACTTT TAA
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| Protein sequence | MYRNYAIKIG VPVRHVQQLL RIMKLSTILL LVGFMQVSAA VYAQKITLSE RNAELKQLFT
KIQEQSDYDF VYTRQQLQTA KPVNIHVAGM ELSDVLRLIF KDQPLTYIID DKTIVVKDRD
IVFPPEAPDP FDIQGQVLNE KGLPLQSATV RIIGTRQQQL TDIDGKFFFT DVLKQGKFIV
SYIGYRTDTI AIRGKTTFII QLDPQAKAIQ EISIVSTGYQ ELPRERATGS FEVVSKEQLQ
HSTDINLVRR LEGITNSMDF RNDLRPVNSS NPNAQRSPLA NLTIRGKNTL NESVNADLNG
NYSGQPLVVI DGIASPYSID KINPNDVESI TILKDAAAAS IWGSRAANGV IVVKTKRGAY
NRALRVSFNS NVATSGKVDL FYNKTMSVSD LIDAQMLQFI NADRSLPSIS ISSLYGQEPV
SPVAEIMDAW KNKGTLTEAA AMAQLDVLRQ NDIRRDYTKY FLRNPITQSY SLAVDGGTEH
SNYRLSAGYD RGINNTRNSS QDHVALTLNA AFRPLKHLEL QGNIAYNVQQ NNEQAPDNRI
TGVSSAPFYP YSRLADDEGR PLELTKMYRP GFVEMFEKTY PTQFLSWRYT PLEDINEGYN
KLKAQSLNMN FSANYRIVEG LSLQATYNYN TGRSNDNTLY RQQSFFMRNL INYFTTSLAS
ANPMTGDPVT PFVRQLPLGG QYNTSLTRSS NQTMRGQLNF DRTWKAKHQI SAIAGLDVAQ
NYSIVTSNGF YGYDENTLQS NNRLDYKTML PIVFSEDFSG YNGEYIPNLD AGFIDNKVRT
FSWYTNMAYT FDSRYTLSAS FRSDLSSEFG RGTNRKGAPY YSVGGAWNIH HEKFYHSTLF
PTLTFRTTFG YNGNVNPSVL ARPLVTYSIF DGVNGLPYAY TSFGTGITNS KLRPEKTGIL
NIGVDFAMKG NRLSGSVQYF IKKTSDLIAG GALDPSTGYT NITYNTGNLL GHGIDISLNS
LNIQRGKFRW NTNFLFSYNR VKVTKLYATA ASAAGQVVSN SSGSYNEGYD LSRLFGYRWA
GLDPATGDPR GYADGHIVTI SNTPDGNSAY NSLQTAPISS LRYFGSAVPV WYGSLRNTFN
YGPFSATAGI LYKMGYYVRR PQSQVLNYSQ LYSTNATIQG IEYQDRWKQA GDESHTNVPS
AVYTATNQNR DNFYYYSEIN VLKGDHIRLQ EINLSYLIPA AKSKFIRNPR IYANISNLGI
IWRANNKGID PEVFDYPNPK SYSLGFSANF
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