| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1347 |
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| Symbol | |
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| ID | 8357465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1608067 |
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| End bp | 1611315 |
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| Gene Length | 3249 bp |
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| Protein Length | 1082 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963505 |
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| Product | transcriptional regulator, NifA subfamily, Fis Family |
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| Protein accession | YP_003121046 |
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| Protein GI | 256420393 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3604] Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGCAAT CAAAATCGGC CACACGGAAA ATACAAAAGG TAGCATCCAC TGTATCCGTG
GAGAACGACA TCGAACTGAC CCGGCTACTA TTGTCCCTCG CAATGGATAT TGCCAGGGTA
AGGGCAAAAA GTGACCTGAT GAACCTGGTG AAAGAGCGCT TCAGCAGCTT TTTCTCTTTC
AGTCACTGTA CTATTTCTGT GCCTTCCGGC AGACCGCAGC ATTACAAAGC CTTTATGCTG
GATACAAGTT CGCTGATAAA AGAACACACA CAGTATCACG AACTGGTGAC TGCCGACTGG
CCCATAGGTG TTGAATGGAT GGTAGCAGCC ATTGACAAAG GAGAACCGTT TATCTGTCAC
CTGGCTAAAA TGAAAGCTGC CGGTGAACTG ACTGATAACA TGCAGATCGT ATATGATGCC
GGCGTGGCAG AAACACTTAA CTGTGGTTTG ATATTCGAAA ATGAAGTGAT CGGGGTATTG
TCCTTTTTCT CCAAAACGCC GGATAATTTT CAACTAGCTA TTTTCCCGGT TGTAAAGGCT
ATTTCCAGCC ATATTTCTTT GGCAGTAGCC AATATCATGG CAAGGGACGA AATAGAGCAA
AAGATCAGGG AAAGAGAGGC TTTATTGAGC ATCAGTGATG CTATTGGTCG CTTAAAAGAT
CGCACAGGAT TACTGGAACT GATTAACACC CAACTGAAAA AACTTTTCCG TTTTACCTAT
AGTCTGGTCG TCAAACTTAG TGATGACGAA CAATCTTGTG CCGCGTTCCT GCTGGATCCG
GACTCTACCA GCCGCTCACA TCCTGATTAC GAAACAATCA GCTCCCGCCG GTACCCGGTG
AATGACGGCA TGATCAGTCA TATACTGGCA GCCAATGCAC CCCTGGTGAT CGATATTGAA
AAAGAAGCTA CTGCGGTGAA CGCGCCTGAT TATATGATCA TGCAATTCAA CGCCGGACTA
AGAGAATGTG TGGGCGTCAC ATTGCGTGAC AATAATCAGC GCCCTATGGG TATCATCCTG
TTTTATGCAG ATGGAAAAGG CTGGTTTAAT GCCAATGTAC AGAACCTGAT CCATGCAGTG
TCTTTCCATC TGGCAACGGC GATGGTGAAT ATCAGTCACC ATGAGTATAT CCAGGCCAGA
GAAGCAGAGA ATGAAATGCT GTTGTCTATC AGCCATTCTA TTGCCAGTAT CTCTGATAAG
AGTAAACTGG TGCCTACTAT TAAAAAGATC CTGCAAACGC GCCTGAATTT CTCTGATATT
GCGATCGTAC AATACAACGT GGCAAAGGGA CTATATAAAG TGATCCTGGA AGATTGTGAG
AAAGCCAATC AACACCAGGA TTTTGAAGGC ATTGCTTTCC GCGAATATTC TTTACAGGAT
GGTTTGCATA ACCGTGTCAT GGCCTCGGAT AGCGCTGTAT TGCTCTCCGT AGCAGCACTG
CAGAAAGTTG GCGGCATACA CTTTGATTTT CTCGCAGAAG CAGGTATCAA TGAAATCGCG
GGCGTCCGTC TCATGCATAA CAATGAAGTC TTCGGAGGCA TGACATTACT TGCTGAAAAT
ATCAATTCTT TTTCTGCGGA TGATATGCGG CTGATAGAAC GGTTCTCTTA TCATCTGTCA
GGACTGGTAG CTAATATGCT GGCCAACGAA GCCATCCAGC AACGTGAAAA GGAAAAGGAG
ATCCTGTTAT CATTCAGCGC TGACATCGCA AGGACCAGGG GGGCGGAGGC ATTAATTGCC
GTTATGCGGC AACGCCTGAA AAGCATCTTT CATTTCAATG ATATTACTGT GGGCATCTTT
AATGCGGAAA AGACGGCTTT CAAGGTCTTG GTGGCTGATG TGGAAGAGCG CCGTACTTCG
CATCCGGAAT TCAAAGAGAT CGCTTTTGCA GAATATCCGA TTGCTGATGG TATCCATGAT
ATGCTGTTGC ATTCTGATAA ACCGGAACTC TTTTACATAG AAAATCTGTT GATGAAAAAT
CCCGGAAGAC ATCCCGGGAT ACAGTTCATC TTCGAACGCG GGATCAAGGA AATTGCCGGC
GTAAAGCTGG TGAATCAGAA TGAAGACATT GGTTTTATTA CCATGTTATC CGAAGAAAGA
AATTCCTTCC GCCATAGAGA TCTGCATCTC CTGAAAGGGA TTTCCGACCA GGTAGCCGTA
GCGGTAGCGA ATATACTGGC AGATGAAAAG ATTGGTCAGC AACTGAAAGA GATCAACGGG
TATAAGGAGA AGCTGGAAGA AGAGAAATTA TACCTGCAGC AGGAGATCAG CAGTGTATAT
ACGCATACGG ACATCATCGG TGCAGGGCCT GAAATGCAAC GCGTATTCCA TATGCTGTCA
CAGGTTTCCT TTGCACAAAG TACCGTATTG ATACTGGGAG AAACAGGTAC GGGTAAAGAA
TTGATTGCGC GGGCCATCCA TAACGGCTCT CCCCGTAAAA ATAAACTGAT GGTAAAGGTG
AACTGCGCGG CATTGCCGGC CAACCTGATA GAAAGCGAAC TATTCGGTCA TGAACGGGGG
AGTTTCACTG GTGCGATAGA AAGGAGGATC GGGAAATTTG AACTGGCCAA CCATGGTACG
CTCTTCCTGG ATGAAATAGG GGAGATGCCG CTGGACCTTC AGGTAAAACT TCTGCGGGCC
ATCCAGGAAA GAGAAATAGA GCGTATCGGT GGGAAAAGTA CCATCAAAAC AGACGTCAGG
ATCATAGCTG CTACTAATCG TAATCTACAA AAAGAAGTGG CTGAAGGCCG TTTCCGCAGC
GACCTGTATT ATCGCCTGAA TGTATTCCCG ATCGTACTTC CGCCTTTACG GGACCGTAAG
GAAGATATAT CGCTGCTGGC AGCACACTTT ATTGAACGCT TTGCCAGAAG CACGGGTCGC
AAGAATATCA AACTGTCCAG CACCGCCATG AAACAGCTGA CAGCTTACAA CTGGCCGGGA
AATGTACGGG AACTGGAACA CGTACTGGAA AGAAGTATTC TACTGACACA GGGTAATATC
ATCCGGGAGA TCCACCTTTC GTCTCAACCA AAGTCAGAGG CGAAAGTGCG CCAGGAAGAA
GATTTCAGCC GAACCCTGGA TGAAATGGAA CGTGATTACA TACTGGGTGT ACTGAACAAG
TGTAAAGGGA AAATATTCGG TCCCGGCGGT GCAGCCGAAA TATTGGGGCT TCATGTATCT
ACCCTGAATC ACCGGATCAG AAAGCTGGGC ATACAGAAAG AACATACCTA TTTTCTGAAG
AAACCATAA
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| Protein sequence | MQQSKSATRK IQKVASTVSV ENDIELTRLL LSLAMDIARV RAKSDLMNLV KERFSSFFSF
SHCTISVPSG RPQHYKAFML DTSSLIKEHT QYHELVTADW PIGVEWMVAA IDKGEPFICH
LAKMKAAGEL TDNMQIVYDA GVAETLNCGL IFENEVIGVL SFFSKTPDNF QLAIFPVVKA
ISSHISLAVA NIMARDEIEQ KIREREALLS ISDAIGRLKD RTGLLELINT QLKKLFRFTY
SLVVKLSDDE QSCAAFLLDP DSTSRSHPDY ETISSRRYPV NDGMISHILA ANAPLVIDIE
KEATAVNAPD YMIMQFNAGL RECVGVTLRD NNQRPMGIIL FYADGKGWFN ANVQNLIHAV
SFHLATAMVN ISHHEYIQAR EAENEMLLSI SHSIASISDK SKLVPTIKKI LQTRLNFSDI
AIVQYNVAKG LYKVILEDCE KANQHQDFEG IAFREYSLQD GLHNRVMASD SAVLLSVAAL
QKVGGIHFDF LAEAGINEIA GVRLMHNNEV FGGMTLLAEN INSFSADDMR LIERFSYHLS
GLVANMLANE AIQQREKEKE ILLSFSADIA RTRGAEALIA VMRQRLKSIF HFNDITVGIF
NAEKTAFKVL VADVEERRTS HPEFKEIAFA EYPIADGIHD MLLHSDKPEL FYIENLLMKN
PGRHPGIQFI FERGIKEIAG VKLVNQNEDI GFITMLSEER NSFRHRDLHL LKGISDQVAV
AVANILADEK IGQQLKEING YKEKLEEEKL YLQQEISSVY THTDIIGAGP EMQRVFHMLS
QVSFAQSTVL ILGETGTGKE LIARAIHNGS PRKNKLMVKV NCAALPANLI ESELFGHERG
SFTGAIERRI GKFELANHGT LFLDEIGEMP LDLQVKLLRA IQEREIERIG GKSTIKTDVR
IIAATNRNLQ KEVAEGRFRS DLYYRLNVFP IVLPPLRDRK EDISLLAAHF IERFARSTGR
KNIKLSSTAM KQLTAYNWPG NVRELEHVLE RSILLTQGNI IREIHLSSQP KSEAKVRQEE
DFSRTLDEME RDYILGVLNK CKGKIFGPGG AAEILGLHVS TLNHRIRKLG IQKEHTYFLK
KP
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