| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1345 |
|---|
| Symbol | |
|---|
| ID | 8357463 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1605557 |
|---|
| End bp | 1606606 |
|---|
| Gene Length | 1050 bp |
|---|
| Protein Length | 349 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644963503 |
|---|
| Product | alpha/beta hydrolase fold protein-3 domain protein |
|---|
| Protein accession | YP_003121044 |
|---|
| Protein GI | 256420391 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0657] Esterase/lipase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACAAAGC AATCAATGAA GAACATACTG GCAGCGGGAG CTGTAGCAGC TGCAAGTGTG
GTGAATAATG CGGATGCGCA GACCAAAGTA CTGGATCCGG CAAAAGACCC GGCAATCGAA
ACCCGGACAA AAGCATTCCT GCAAGTATTG AACAGCGGCG GTGGTAAACC CATGGAACAG
ATGGCGGCTA CTGATGCCCG TAAAGTACTG GAAGGTGCAC AATCTTCTGT AAAAGTAGAT
CTCTCGGGAG TTGACATAAC TGAGAGAACC ATTACGGAAG ACGGGCTGCA GGTAAAACTC
TTTATCGTAC GTCCATCCGG CGTAACAGGG ATATTACCCG CATTTATGTT TTTCCATGGC
GGTGGCTGGG TATTGGGTGA TTTCCCTACA CACCAGCGTT TTGTGAGAGA CCTGGTAGTG
TATTCCGGTG TGGCAGCCGT ATTCGTAGAA TACAGCCGTT CTCCGGAAGT AAAATACCCG
GTAGCGCTCA ACGAAGCCTA CGCTGCTACC AAATGGGTAG CTGCACACGG CGCAGAGGTC
AATCTTGATG GCAAAAGACT GGCGGTAGTA GGCAATAGTG CCGGTGGTAA TCTGACGGCT
GCGACCGCAC TGATGGCTAA AGACAAGAAA GGTCCTGAGC TGAAATTCCA GCTTTTGTTC
TGGCCGGTAG CCGATGCCAA CTTTGAAACC GGATCTTATA ACCAGTATGC TACGTCCCGT
TTCCTGACAA AGAACATGAT GATCTGGTTC TGGGACAATT ACGTCCCCAA ATCCCAGCGT
AAAGAGATCT ATGCAGCGCC TTTGCAGGCT AGTCTGGAAG AACTGAAAGG CTTACCCCCA
ACCCTGGTGC AGACGGCTGA AAATGACGTA CTGCGTGACG AAGGAGAAGC ATATGCCCGC
AAGATGGATG AAGCAGGCGT ACCTGTTACC CTTGTAAGAA TTCAGGGCAT GATACATGAC
TACGGGCTGC TAAATCCATT GGCTGATGTA CCGGCGGTAC AATCAGCGTT AAGATATGCC
GCAAATGAGC TGAAAAATGC CTTAAAATAG
|
|---|
| Protein sequence | MTKQSMKNIL AAGAVAAASV VNNADAQTKV LDPAKDPAIE TRTKAFLQVL NSGGGKPMEQ
MAATDARKVL EGAQSSVKVD LSGVDITERT ITEDGLQVKL FIVRPSGVTG ILPAFMFFHG
GGWVLGDFPT HQRFVRDLVV YSGVAAVFVE YSRSPEVKYP VALNEAYAAT KWVAAHGAEV
NLDGKRLAVV GNSAGGNLTA ATALMAKDKK GPELKFQLLF WPVADANFET GSYNQYATSR
FLTKNMMIWF WDNYVPKSQR KEIYAAPLQA SLEELKGLPP TLVQTAENDV LRDEGEAYAR
KMDEAGVPVT LVRIQGMIHD YGLLNPLADV PAVQSALRYA ANELKNALK
|
|---|
| |