Gene Cpin_1340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1340 
Symbol 
ID8357458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1598915 
End bp1599877 
Gene Length963 bp 
Protein Length320 aa 
Translation table11 
GC content45% 
IMG OID644963498 
Producthypothetical protein 
Protein accessionYP_003121039 
Protein GI256420386 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCACCG GTAGCTGCGA ACAATTCCCT AAATTACGTC CTCAATTTAT ACCCTATATG 
ACAAAAAGTT TTAAAGCCCG CATCTGGGGA CTGGTGCGTT GGGCGACCCT GATTTTTGCT
GTACTGTTTG TTTTCAGACT TATTTATGGA TATGTAGCTA CTGACACCCG GCAGACCAAT
GACTATAGCG TTGACTTCTT TGAGAATATC AGCAATCTGA GAAAAAACTA TGCATCCGAA
AAGGTGCAGT ACAAGAGTAG CAATTCTATG TCTCAACCGG ACATGTCGGC CCCCGTTGCC
GCTACTCCCA GCCAGAAGTA TGAAAAAACG GCGTCCATCC GTACAAAGTC GTCTCATTTT
GAGGACGATG CCAGACAAAT CTCCCAGCAA ACGGAGTCCT TCAAAGCAAT CGTACAGTAC
GAACAGGCTT TAGGACTGAA AGGCGGTCGC GAGCTCCACC TGATGATTGG TGTTAATCCG
GAAGTGTTTG ATTCCTTCTA CCTGGCCATC CAGAAAATAG GCGTGATCAG ATCTACCGAG
ATCACCAAAG TGGATAAAAC CAATGAATAT CGTCAGCTGA ATGCACAGAA AGCCTCTCTA
TTGAAAACAC TGGAATCACT GAATGAATTA AAATCAAAAC CCGGCCCTAT TACAGACCTG
GTGGCCCTGC ATGATAAAAT CCTGGAGACA GAAGGGAAGT TGCAGGACCT GGGTGTTGAA
CTGGGAAATT TTGATACGGA GAATGAGTTC TGTACGGTAC GTGTATCACT GTATGAGGGT
GCGACCGAAA AGAAACCTAT CAGTTTTATA CATAGGGTGA GAGTAGCGCT GGAATGGACG
ATACATTACT TTACTTACCT GGTATTTGCA GCTGTAGGCA TCGTGTGTGG TGCGTTCGTG
TTGCTGGTGA TCGTTGATAA ACTGAAACTG ATCAATAAGA TCGCGAAAAA ACTGGAAGAA
TGA
 
Protein sequence
MCTGSCEQFP KLRPQFIPYM TKSFKARIWG LVRWATLIFA VLFVFRLIYG YVATDTRQTN 
DYSVDFFENI SNLRKNYASE KVQYKSSNSM SQPDMSAPVA ATPSQKYEKT ASIRTKSSHF
EDDARQISQQ TESFKAIVQY EQALGLKGGR ELHLMIGVNP EVFDSFYLAI QKIGVIRSTE
ITKVDKTNEY RQLNAQKASL LKTLESLNEL KSKPGPITDL VALHDKILET EGKLQDLGVE
LGNFDTENEF CTVRVSLYEG ATEKKPISFI HRVRVALEWT IHYFTYLVFA AVGIVCGAFV
LLVIVDKLKL INKIAKKLEE