| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1333 |
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| Symbol | gatA |
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| ID | 8357451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1589062 |
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| End bp | 1590501 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644963491 |
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| Product | aspartyl/glutamyl-tRNA amidotransferase subunit A |
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| Protein accession | YP_003121032 |
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| Protein GI | 256420379 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases |
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| TIGRFAM ID | [TIGR00132] glutamyl-tRNA(Gln) and/or aspartyl-tRNA(Asn) amidotransferase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGTCTGAAT ACAGCAGTAT ATCGGCTTTT CATGAAGCAT TATACGCCGG CAGAACAACC
TGTACGGAGA TGGTACGGTA TTACCTTGAC CGTATCGGGC AGACAAAACA CCTGAATGCT
TACCTGGAAG TTTTTGAAGA GGAAGCCCTT GCGAAAGCGC ATGCACTGGA TACCCGTATA
AAAAACGGGG AATCTGTGGG AGCGCTTGCA GGCATTGTGA TAGGCATTAA GGATGTTATC
TGTTATAAAG GACATAAAGT AAGCGCTGCT TCTCGCATAC TGGAGGGATT CACATCCCTG
TATTCTGCTA CGGCAGTCGA AAGACTCCTG GCAGAAGACG CCATTATTAT TGGTAATCTC
AATTGTGACG AGTTTGCAAT GGGATCCACA AATGAGAACT CCGCCTACGG TCCGGTGTTG
AACGCACTGG ACAATTCCCG GGTACCGGGA GGGTCCTCCG GAGGGTCAGC AGTAGCTGTG
CAGGCAGATC TTTGTATGGT CAGCCTTGGT AGTGATACAG GTGGTTCTGT AAGACAACCT
GCTGATTTCT GTGGTATTGT AGGATTAAAA CCAACTTATG GCAGGATCTC CCGCTATGGG
TTAATTGCAT ATGCCTCTTC GTTTGATCAG ATTGGGATTT TTGGCAGGAA TATTGCAGAT
GTGGCAAGGG TGCTGCAGTT TATTGCAGGG CCCGATGAGT ATGATAGTAC GGCTTCAAAT
GAGGAAGTAC CTGATTACCA GATCGTACAC AATAAATCCT GGAAAATAGC GTATTTAAGA
GATGCGTTGT TTCACCCCGG CCTGGATGAA GAAATGAAGG AAGGCTACAC CCGCTTTTTT
GAGGAGTTGG AAGCTGCAGG TGATACTGTT ACAGCAGCTG ATTTCGCTTA CCTTGATTAT
GTAGTGCCTG CATATTATGT GCTGACCACT GCAGAAGCTT CTTCAAACCT TTCACGGTTC
GACGGAGTTA AATACGGACA CAGAACTTCA TTAAATAATC TTGAATTAGC TGACTTTTAC
AAGAAAAGTC GGTCCGAAGG TTTTGGAAAA GAAGTAAAAC GGCGTATCTT ACTTGGGACT
TTTGTACTTA GTGCAGGTTA TTATGATGCC TATTTTGCTA AAGCTCAACA AGTTAGACGA
ATGGTGGTGG ATAAATTGAA TGAAATTTTA TCTGAATATG ATGCCATCGT AATGCCAACT
GTACCGTCGA CAGCATTTAA AATTGGAGAA AAAACAAATG ATCCGATAGC CATGTACCTG
GCCGATATTT ATACGGTACT GGCAAATCTG GCAGGGGTTC CGGCAATTTC CGTACCTTTG
CAGCGGCATT CAAATGGGAT GCCATACGGT GTACAGATCA TCACAAAGCA ATTTAGCGAA
GCAAACCTGT TAAGCATTGC GGAACACGCC ATGCAAATAA GGCAGGTTAC TCCTGTTTAA
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| Protein sequence | MSEYSSISAF HEALYAGRTT CTEMVRYYLD RIGQTKHLNA YLEVFEEEAL AKAHALDTRI
KNGESVGALA GIVIGIKDVI CYKGHKVSAA SRILEGFTSL YSATAVERLL AEDAIIIGNL
NCDEFAMGST NENSAYGPVL NALDNSRVPG GSSGGSAVAV QADLCMVSLG SDTGGSVRQP
ADFCGIVGLK PTYGRISRYG LIAYASSFDQ IGIFGRNIAD VARVLQFIAG PDEYDSTASN
EEVPDYQIVH NKSWKIAYLR DALFHPGLDE EMKEGYTRFF EELEAAGDTV TAADFAYLDY
VVPAYYVLTT AEASSNLSRF DGVKYGHRTS LNNLELADFY KKSRSEGFGK EVKRRILLGT
FVLSAGYYDA YFAKAQQVRR MVVDKLNEIL SEYDAIVMPT VPSTAFKIGE KTNDPIAMYL
ADIYTVLANL AGVPAISVPL QRHSNGMPYG VQIITKQFSE ANLLSIAEHA MQIRQVTPV
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