| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1327 |
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| Symbol | |
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| ID | 8357445 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1584757 |
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| End bp | 1586082 |
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| Gene Length | 1326 bp |
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| Protein Length | 441 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 644963485 |
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| Product | signal recognition particle protein |
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| Protein accession | YP_003121026 |
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| Protein GI | 256420373 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0541] Signal recognition particle GTPase |
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| TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.609194 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCGAAT CATTATCAGA GCGGCTCGAC TCGGCGTTTA AACAACTGAA AGGTGAAGGC
CGTATCAGTG AAATCAATGT GGCCTCTACG GTGAAAGAAA TTCGCCGTGC GCTGGTGGAT
GCTGACGTAA ACTATAAAAT TGCGAAAGAC TTCACTGACC GTGTAAGAGA AAAGGCCCTG
GGTGAAAAGG TAATTACAGC CATTTCTCCC GGACAGCTGA TGGTGAAGAT CGTTAAAGAC
GAGCTGACTG AACTGATGGG TGGCAGCGAA GCGGAACTGG ATGTTAAGTC CAATCCGTCT
ATCATCCTGA TTGCAGGTTT GCAGGGTTCC GGTAAAACCA CCTTCTCCGG CAAACTGGCG
AACTTCCTGA AAACTAAAAA AGGAAAGAAA CCACTCCTGG TAGCAGCGGA TATTTACCGT
CCGGCGGCGA TTGACCAGCT GAAAGTGCTG GGTGAGCAGA TCGGAGTGGA AGTATATAGT
GAGCCGGAGA ACAAAGACGC GGTGAAAATT GCACAGAACG CAATCGCACA CGCTAAACAG
AACAATAACA ATATTATTAT CATAGATACC GCCGGTCGTC TCGCTGTAGA TGAAGTGATG
ATGACTGAGG TAGCGAATGT GAAAGCAGCT GTAAAGCCGA ATGAGATCCT CTTCGTGGTG
GATTCCATGA CTGGTCAGGA TGCTGTGAAT ACAGCCAAAG CGTTTAACGA ACGCCTCGAC
TTCAGCGGTG TGGTACTGAC CAAACTGGAC GGTGACACAC GTGGTGGTGC GGCGCTGACG
ATCAAATACA CGGTAGAAAA GCCGATCAAG TTCGTGAGCA TGGGCGAAAA GCTCGACACG
CTGGACGTAT TCTATCCTGA ACGTATGGCA CAACGTATCC TGGGGATGGG TGATATCACT
ACCCTCGTGG AACGTGCACA GGCGCAGTTC GATGAAGAAC AGGCGAAAAA ACTGGAGAAG
AAGATCCGTC AGAACCAGTT TGATTTCGAA GACTTCCGCG AGCAGCTGCA GCAGATCAAG
AAAATGGGTA ACCTGAAAGA CCTCATGGCG ATGATTCCGG GGGTAGGTAA GGCCATTAAG
GATATAGACA TCAGCGACGA CGCATTTAAA GGCATTGAAG CAATGATCGG TTCTATGACG
CCATATGAGC GTAACAACCC GGATAGTATT GATGGTAGTC GTCGTAAGCG TATTGCTAAG
GGCTCCGGTA AAGATATCCA GGATGTGAAC CAGTTCATGA AGCAATTTGA CCAGATGCGT
CAGATGATGA AGATGATGAA CAAATTCGGA GCAGGTGGTA AAGGCTTAAG AGCTTTAGGC
AGGTAG
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| Protein sequence | MFESLSERLD SAFKQLKGEG RISEINVAST VKEIRRALVD ADVNYKIAKD FTDRVREKAL
GEKVITAISP GQLMVKIVKD ELTELMGGSE AELDVKSNPS IILIAGLQGS GKTTFSGKLA
NFLKTKKGKK PLLVAADIYR PAAIDQLKVL GEQIGVEVYS EPENKDAVKI AQNAIAHAKQ
NNNNIIIIDT AGRLAVDEVM MTEVANVKAA VKPNEILFVV DSMTGQDAVN TAKAFNERLD
FSGVVLTKLD GDTRGGAALT IKYTVEKPIK FVSMGEKLDT LDVFYPERMA QRILGMGDIT
TLVERAQAQF DEEQAKKLEK KIRQNQFDFE DFREQLQQIK KMGNLKDLMA MIPGVGKAIK
DIDISDDAFK GIEAMIGSMT PYERNNPDSI DGSRRKRIAK GSGKDIQDVN QFMKQFDQMR
QMMKMMNKFG AGGKGLRALG R
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