| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1316 |
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| Symbol | |
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| ID | 8357434 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1572906 |
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| End bp | 1575032 |
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| Gene Length | 2127 bp |
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| Protein Length | 708 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963474 |
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| Product | Diverse 7TM receptor transmembrane region |
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| Protein accession | YP_003121015 |
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| Protein GI | 256420362 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCCGAT TTATCGCTCT ATGGCTACTT GCTATCTTAG GTTACCAGCA AATGCAGGCG
GCAACCCCTA TTGTATACCA CAACAATATG CCCCTGACCC GGATCGGCAA AAACCTTGAA
ATATATACTG ACAAGACCAA TGCACTGGAT ATCAATGCTG TCAGCAAAAA GACATTCAGT
TTTCCGGATG AAAATGTCCC AAACCTACAG ATCACTCCCC ACACACATTG GGTACGCTTT
ACCGTTACTA ACGAGTCAGA TCTCCGCGAG ATCATGCTGG AGGTAGAATA CCCTACCATA
GACGATATTA CCCTTTTTGA GCTACGCCCC GACGGTACTT ACGACAGTAC ACGCCTGGGA
GAGTTTACCA GTTACCATAA CCGCCCGGTT GACCACCAGA ACTATATTTT TCCGTTATAC
ATCGCCACGC ATACCACCCG GCAATATTAC CTGCGGGTAA TTGCCGGCGA ACAGGTACAA
CTCCCCATGT CCATAGGCAC ACGGGACCAG GTATCCGAAA AGAACGACTA CCGTGATCTG
ATATTCGGTT TATACATCGG AGTTATGCTG GCGATGTCGT TTTATAACCT CTTCCTGTAT
CTGTCTACAA AAGACAACAG TTACCTGACC TACGTGTCTT ATAACGTGTT TGTCGCCCTG
ACACAGGCTA CCTTACAGGG TTATTCGTTC CGATTCCTTT ATCCGGACAG TCCCTGGATG
GCCCAACATG CGACGGTACT CGTACCTATA CTCAACGGAC TGACCGCACT GGTCTTCATC
CAGCAATTCC TGCTGACGAA ACAGTTTTAT AAAAAGGGGC ATCGCCTGAT CAACATCCTG
CTGATATTAT ACATGGGATG TTTCATACCG GCACTCCTGA ATAAGTATAT CATTGCCCAG
ATATGGGTCC AGATGGTAGT AGGAGCTGCC GCAGTAAGCG TATTCTATAT ATCGCTGCGA
ATGAGTATGA AGGGCTATAG TTCCGCACGT TTCTTCCTGC TGGCATGGTC TATATTCCTG
CTTAGCGTAC TGGTATTTGT GCTGAGGAAT GCCAACGTAC TCCCCTATAA TGAGTTCACC
TATTATGCAT TGCAGATCGG TTCCGGTATG GAAGCCCTCC TGCTCTCCTT TGCACTGGCC
TATAAAATCA ACCTTTTTAA GGCAGAAGCC CTGCATGCTT CCCAGGAAAA TGAGCGCCTG
GTGAAAGAAC AGAATATCAT CCTGGAAGAA AAGGTGACCC AGCGTACGGA AGAACTACAA
ACCTCCAATG AAGAACTGAA CGTCGCGTTG AAGAACCTGA AAGAAGCCCA GACCCAACTC
GTAGAAAGAG AGAAAATGGC CTCCCTCGGT CAGCTGACGG CCGGTATTGC CCATGAAATA
AATAATCCGA TCAATTTTGT CACTTCTAAT ATAAAGCCGC TTAAACTGGA TATCCAGGAT
ATCAGAACAT TGCTGGATAA GTACGATGAC TTGCCAAACA CCACGGATAT CCAGGGAGCA
TTGAAAGATA TTGCCGCCTT TAAACAACAG ATCGATATTG ATTATATTCA CGAAGAAATC
TCTTCGCTGA TCAAAGGGAT TGAAGATGGC GCTTCCAGAA CCTCGGAAAT TGTCCGCGGA
TTACGTACCT TCAGTAGACT GGATGAAAGC GATGTTAAAT CAGTGGATCT GCACGAAGGA
ATCGACAGTA CACTGGTATT GCTGAAAAAC AGTATCCCGA CAAATGTCAA AGTAATAAAG
GACTACGGTT CTTTACCCAA AATAGAGTGT TATGCCGGCA AGATCAACCA GGTGTTTATG
AACATTCTGA CCAATGCATT TAACGCTATT AAGACAAATA ACCAGGACCG TGAAGAAGTG
GTAACGATCA CTACCCGCGA AGATAACGGC CTTGCCCTCA TCAGTATAAA AGACACCGGC
CCCGGAATGA CAGAGCAGGT AAAAGAGAAG ATCTTCGATC CTTTCTTTAC CACGAAAGAT
GTGGGAGAAG GTACAGGCTT AGGCCTTTCC ATTGTATTCA GTATTATTGA AAAGCACAAC
GGACGTATCG AGGTGATCAC CGCTCCTGAT AAAGGTGCAG AATTTATTAT ATATTTACCC
ATGAGCGTAA CCGCTCAGGC GTCTTAG
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| Protein sequence | MFRFIALWLL AILGYQQMQA ATPIVYHNNM PLTRIGKNLE IYTDKTNALD INAVSKKTFS
FPDENVPNLQ ITPHTHWVRF TVTNESDLRE IMLEVEYPTI DDITLFELRP DGTYDSTRLG
EFTSYHNRPV DHQNYIFPLY IATHTTRQYY LRVIAGEQVQ LPMSIGTRDQ VSEKNDYRDL
IFGLYIGVML AMSFYNLFLY LSTKDNSYLT YVSYNVFVAL TQATLQGYSF RFLYPDSPWM
AQHATVLVPI LNGLTALVFI QQFLLTKQFY KKGHRLINIL LILYMGCFIP ALLNKYIIAQ
IWVQMVVGAA AVSVFYISLR MSMKGYSSAR FFLLAWSIFL LSVLVFVLRN ANVLPYNEFT
YYALQIGSGM EALLLSFALA YKINLFKAEA LHASQENERL VKEQNIILEE KVTQRTEELQ
TSNEELNVAL KNLKEAQTQL VEREKMASLG QLTAGIAHEI NNPINFVTSN IKPLKLDIQD
IRTLLDKYDD LPNTTDIQGA LKDIAAFKQQ IDIDYIHEEI SSLIKGIEDG ASRTSEIVRG
LRTFSRLDES DVKSVDLHEG IDSTLVLLKN SIPTNVKVIK DYGSLPKIEC YAGKINQVFM
NILTNAFNAI KTNNQDREEV VTITTREDNG LALISIKDTG PGMTEQVKEK IFDPFFTTKD
VGEGTGLGLS IVFSIIEKHN GRIEVITAPD KGAEFIIYLP MSVTAQAS
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