| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1309 |
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| Symbol | |
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| ID | 8357427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1565041 |
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| End bp | 1566627 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963467 |
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| Product | drug resistance transporter, EmrB/QacA subfamily |
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| Protein accession | YP_003121008 |
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| Protein GI | 256420355 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.576525 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAACGA CCGAAAACTC GCTTGTTGAA TATGGATCCA GGCGGATCAT TATTACCGTC
GTGGCAGTGG TATGTGCCAT GCTTGAGCTG ATCGACACTA CCATCGTCAA TGTAGCGCTC
AATGACCTTC GCGGAAACTT AGGCGCAACT GTCAACGAAA TTGGATGGGT TATCACTGCT
TATTCATTAG CAAATGTGAT TATCGTCCCT ATGACCAGCT GGCTTTCCCA GCAATTTGGG
AGACGCAATT ACTTCGCAGT ATCTATTCTC GTTTTTACCA TTTGTTCCGT CCTGTGCGGC
AGTGCCACTA ATATATGGCA AATCATGCTA TACCGTTTCG TACAGGGACT TGGTGGCGGC
GCCTTACTGG TGACCTCACA AACGATCATC GCTGAAAGCT GGCCATCTGA GAAAAGAGCC
GTTGCACAAG GGATCTATAC ATTGGGACTC ATCATCGGAC CAACGATCGG ACCAACACTG
GGTGGCTACC TGATCGATCA TTATTCATGG CCCGTGATCT TTTACATCAA TGTTCCGATT
GGTATTGTCG CCACGGTTTT ATCTCTTCAA TATGTCAGGA GTCCGCGGTA CGAACAAAAG
CGACCTGCCA ATGAAGTTGA CTGGCTGGGT ATTATATTAC TGACCGTTGG TGTATCCTCG
CTGCAATACG TACTTGAAAA GGGACAGGAA GACGACTGGT TTAGCAGTAA ACTCATTATC
ATATTGACCG TAATGGCCGT ATTTGGTATT ATCTGCTTCA TCTGGCGGCA ATTAAATTAC
CGTTATCCGA TTGTTGAATT AAGGGTACTA AGAAATACCA ATCTAAGGAT TGGAACGATA
CTTACCTTTT TAATAGGTTT TGGCTTGTTT GGTACGACCT TCGTGCTTCC CTTGTATACC
CAGAGCCTGC TCGGATGGAG CGCTTTCCAG TCAGGCATAT TACTTCTGCC GGGCACTCTT
TTTGTGGCCG TCGTAGTAGT AATCGTATCA CGGCTGATTC AGCGGGGTGT TTCCTCTAAA
TACCTGATCG TGTTAGGAAT GCTTACCTTC TTTGTCTACG GATACTGGTC TTATCATCTG
CTGACCCTGC AAACGGGAAG TGCGAATTTA TATGCCGTGT TATTCGTCAG GGGATTAGGT
CTTGGTCTGC TGTATGTACC GGTAACGACC ATGTCTCTTT CCACCCTGGA AGGAAAAGAG
ATCGCCCAGG GCGCAGCGCT GACCGGCATG TTCCGTCAAC TCGGTGGCGC ATTTGGCGTC
GCACTGATCT CGACGTTTAT CGCACGGGAA TCTCAACAAC ATCGCGTTAC ACTGGTCAGC
CATCTAAATC AGGATGATCC GACCGTACAA CAAAGACTCT CGCAATTAAT TGCCGGTTTT
CAACAACGGG GTTTTGACTT TTTAACGGCT AAACAAAGCG CTTATGCCGT TTTAGAAAGT
TCCGTACAGC GACAATCCAC CCTGCTTTCT TATATGGATG TATTTTTATG GGTAGGCTAT
TTATTTTTAG TGAGTGTGCC TTTGGTGCTG ATTTTTGTAA AAGAATCGCA ACGGAAAACG
CGTGTGATCG AAACTGCAGG GCATTGA
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| Protein sequence | METTENSLVE YGSRRIIITV VAVVCAMLEL IDTTIVNVAL NDLRGNLGAT VNEIGWVITA
YSLANVIIVP MTSWLSQQFG RRNYFAVSIL VFTICSVLCG SATNIWQIML YRFVQGLGGG
ALLVTSQTII AESWPSEKRA VAQGIYTLGL IIGPTIGPTL GGYLIDHYSW PVIFYINVPI
GIVATVLSLQ YVRSPRYEQK RPANEVDWLG IILLTVGVSS LQYVLEKGQE DDWFSSKLII
ILTVMAVFGI ICFIWRQLNY RYPIVELRVL RNTNLRIGTI LTFLIGFGLF GTTFVLPLYT
QSLLGWSAFQ SGILLLPGTL FVAVVVVIVS RLIQRGVSSK YLIVLGMLTF FVYGYWSYHL
LTLQTGSANL YAVLFVRGLG LGLLYVPVTT MSLSTLEGKE IAQGAALTGM FRQLGGAFGV
ALISTFIARE SQQHRVTLVS HLNQDDPTVQ QRLSQLIAGF QQRGFDFLTA KQSAYAVLES
SVQRQSTLLS YMDVFLWVGY LFLVSVPLVL IFVKESQRKT RVIETAGH
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