Gene Cpin_1278 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1278 
Symbol 
ID8357394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1528531 
End bp1529325 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content48% 
IMG OID644963434 
ProductUDP-N-acetylglucosamine acyltransferase 
Protein accessionYP_003120977 
Protein GI256420324 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1043] Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase 
TIGRFAM ID[TIGR01852] acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.290846 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCATC CGCTTACTTA CATTCACCCG GACGCGAAGG TTGCGCCAAA CGTGAAAATC 
GATCCGTTTA CCGTTATTCA CAAAAATGTT GAAATCGGTG AAGGCACCTG GATCGGTTCA
AACGTCACTA TTATGGAAGG CGCAAGGATC GGCAAGAACT GCCGTATCTT CCCCGGGTCT
GTAATTTCCG CTATCCCGCA AGACCTCAAA TTTGCTGGCG AAGACACTAC AACCGAAATC
GGAGACAACA CCACCATCAG AGAGTATGTA ACCATTAACC GAGGAACCAA GGACAAATGG
AAAACCGTTA TCGGCAAGAA TTGCCTGATC ATGGCCTATA GCCATATTGC TCACGACTGC
GAAGTTGGTA ACAGCTGCGT ATTCTCCAAC AGCACTACAC TGGCAGGTCA TATCACCGTG
GGCGACTACG TGGTACTTGC AGGTATGGTG GCTGTACAAC AATTCTGTAA AATTGGCGAT
CATGCCTTTG TTACAGGTGG CTCCCTGGTA AGAAAAGACG TGCCGCCTTT CGTAAAAGCA
GCCCGTGAAC CGCTGTCTTA CGTAGGTGTA AACTCTATCG GTCTCAAAAG AAGAGGTTTC
TCACTCGAAA AGATCAATCA CATACTTGAC ATATACCGTG TGATATTCGT GAAAGGATAC
AAGCTCTCCA AAGCAATCAG TATCATCGAA GCGGAATATC CCGCCACCGA CGAAAGAGAT
GAAATACTCT CCTTCATCCG TGAATCCGGC CGGGGCATTA TGAAAGGTTA TACGTCACTA
GCCGGCGACG AATGA
 
Protein sequence
MIHPLTYIHP DAKVAPNVKI DPFTVIHKNV EIGEGTWIGS NVTIMEGARI GKNCRIFPGS 
VISAIPQDLK FAGEDTTTEI GDNTTIREYV TINRGTKDKW KTVIGKNCLI MAYSHIAHDC
EVGNSCVFSN STTLAGHITV GDYVVLAGMV AVQQFCKIGD HAFVTGGSLV RKDVPPFVKA
AREPLSYVGV NSIGLKRRGF SLEKINHILD IYRVIFVKGY KLSKAISIIE AEYPATDERD
EILSFIRESG RGIMKGYTSL AGDE