Gene Cpin_1270 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1270 
Symbol 
ID8357386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1519662 
End bp1521068 
Gene Length1407 bp 
Protein Length468 aa 
Translation table11 
GC content47% 
IMG OID644963426 
Producthypothetical protein 
Protein accessionYP_003120969 
Protein GI256420316 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTACAT ATACTGACAT TGCTGCCGAT CAGATGATCT GCCTGCAATG CGGAGCGCCT 
CTTATAAAAG AGGAGACATA CAGTTGTGCT GTATGCCATA AAGACTATCA GCACCTGCAT
GGGGTGCCAT TGTTTATGAG CGACGAAGAG GAATATATTG CCGGTATGGC AAAACAATAC
GCAGATTTTG CCCGCCAGAA GGAAACTGAA TTGGGTGAAC TGGAACAGGC TTTTGAGAAC
AGACCCTACA GACAGGTATA CTGGCAGCAA TTAAGAAAAG CATTGTCCGG CAATAATGAG
CTAATAGGCA CACTGGTCAA CATGCTATGT GAGCGTGTGA GTCCTGCTGC ACTGCTCAGG
ACCAGGTCTT CTTCCGCATC AGCCGCCGTC CTGAAAGATT TTCAATACCT GAAACGGGAC
TGGTGCTGGC TGGAAGAAGG AGAATTGCAA TTGTCTGAAA TACTGGGCCC ACTGGAAGAA
GTAATCAGTG ACGCCATCAG CGACCGGGAG AATATTCTTG TGGCAGGGGC AGGAGTTGGG
CGTATCGCTG TGGAACTCTG CGGATATTTT GAAAAGGTAT ATGCAACAGA TCTGTCCTTT
TCTATGCTCT GGTTCTTTCA GCAGTTGCTA AAAGGCGCGA GTATCAATTT TCATGAAATC
AACTACGCTA ATATATTACA GGATACTTAT GTAGCCAGAG AACTGACCGC CAGCTATCAT
GCTCCTTTCA GCGGGTATAC GTTACCCGAG GTGAGTGATA AGCTTTTCTG TTACATTTCG
GATATCCTGC ATTCTCCGCA TAAAGACGGC AGTATCTCTG CTTTTTGTTC TGCCTATTTT
ACGGACGTAC TGGCCCTGAA GCTCTTATTG CCTGAAGTAA AAAGATTGTT GAAACCGGGC
GGTGTGTTTA TTCATCTCGG ACCACTGGGA TATGGGTTTG AAGACGTCAG CGAGAAGCTG
GCTGCCAACG AGATTAGGGC TGCTTTTATA AGGGCTGGCT TTGAAGTGGT GCGGGAGGAA
GTGATCACAT GCAACCACCT GGAATCGGAA TTGTCTATGC AGACGGTTTC CCTGAAGAAC
TGGCTGGTCG TGTTTCGTAA GAAAGAATAT GTACAGCGGC CGATAGAGGA TACCACCATA
TTCGGTGTTG CTGAAGGCAT AAAATATGAA GTGAGAGGCC GGCTGGAAGA AGATATTCCG
ATGGATCAGA TTATGATCCG TACGGCAGAA GGAGAGGCGG TTATCATTGC CGAACTGGCT
TTTGACATAT TGCGCTTTCT GGCTGCGCCA CAGACATTCG AAGCATTGAT CACGCACCTG
GATAGTTGCT ATGAGATCGA AGCACCTTCT ATGATAGCAG ATGTATTACT GCACCTTGAA
TCACTGAAAG TGATCAACAG AATCTAA
 
Protein sequence
MITYTDIAAD QMICLQCGAP LIKEETYSCA VCHKDYQHLH GVPLFMSDEE EYIAGMAKQY 
ADFARQKETE LGELEQAFEN RPYRQVYWQQ LRKALSGNNE LIGTLVNMLC ERVSPAALLR
TRSSSASAAV LKDFQYLKRD WCWLEEGELQ LSEILGPLEE VISDAISDRE NILVAGAGVG
RIAVELCGYF EKVYATDLSF SMLWFFQQLL KGASINFHEI NYANILQDTY VARELTASYH
APFSGYTLPE VSDKLFCYIS DILHSPHKDG SISAFCSAYF TDVLALKLLL PEVKRLLKPG
GVFIHLGPLG YGFEDVSEKL AANEIRAAFI RAGFEVVREE VITCNHLESE LSMQTVSLKN
WLVVFRKKEY VQRPIEDTTI FGVAEGIKYE VRGRLEEDIP MDQIMIRTAE GEAVIIAELA
FDILRFLAAP QTFEALITHL DSCYEIEAPS MIADVLLHLE SLKVINRI