Gene Cpin_1269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1269 
Symbol 
ID8357385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand+ 
Start bp1518928 
End bp1519656 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content43% 
IMG OID644963425 
ProductMethyltransferase type 12 
Protein accessionYP_003120968 
Protein GI256420315 
COG category 
COG ID 
TIGRFAM ID[TIGR00740] methyltransferase, putative 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.645597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAACG AATTAACAAC GTTCCATGCC GGTGATACGA TCGTTGCCGC CAATGCAGGA 
TGGACCTTCT CCGGTAAAAC TGTGGCCGCC TTTGATACAC ACGCTCCCAA GTCGATTCCC 
TTATATCATG AAGGACATGA CCTTATTGTA AAGTTATCGG ATTTCTTTTT GTCGGACGAT 
TCAGTATGTT ATGAAATAGG TTGCTCAACA GCCGAACTCA CCAAACAGTT AGCCATTAAC 
TGTAAAGAAA AAGATGTTGA AATAATAGGC GTAGACAGAG AAGCCGATAT GATCAGTGCT 
GCAAAGGAAA AATGCAGTGC ATATCCGCAG GTTTCTTTTA TATGTGATGA TATACTTGAT 
ATCGACCTGA AGAAAAGTGA CCTGATCATC CTGTATTACA CCCTTCAATT CATAAAGCCG 
AAAGTGCGGC AACTGGTGGT GGACAAAATA TACAATGCGC TCAACTGGGG CGGTGCGTTA 
ATCATGTTTG AAAAAGTACG GGCGAATGAT GCGCGTTTTC AGGATATTGC TACCAGCCTC 
TATACGGAGT TTAAACTGGC GCAGGGTTTT ACTGCCGGAG AGATTCTGGC TAAGAGCAGA 
AGTCTGAAAG GTGTACTGGA ACCTTTTTCT ACTACCGGAA ATAAAGACCT GCTGACAAGG 
GCCGGTTTTG TAGATATCCT GTCTGTGATG AAATATGTTT GTTTTGAGGG TTTTCTTGCT 
ATAAAATAA
 
Protein sequence
MDNELTTFHA GDTIVAANAG WTFSGKTVAA FDTHAPKSIP LYHEGHDLIV KLSDFFLSDD 
SVCYEIGCST AELTKQLAIN CKEKDVEIIG VDREADMISA AKEKCSAYPQ VSFICDDILD 
IDLKKSDLII LYYTLQFIKP KVRQLVVDKI YNALNWGGAL IMFEKVRAND ARFQDIATSL 
YTEFKLAQGF TAGEILAKSR SLKGVLEPFS TTGNKDLLTR AGFVDILSVM KYVCFEGFLA 
IK