Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1263 |
Symbol | |
ID | 8357379 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1511775 |
End bp | 1512821 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963419 |
Product | oxidoreductase domain protein |
Protein accession | YP_003120962 |
Protein GI | 256420309 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.616753 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 45 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAAAAAA TCATCAAAAC CGGCATATGC GCCTATGGCA TGTCAGGCCA CGTTTTTCAC GCACCTTTTA TTCATGTACA TCCCGGATTT GCATTCACGG CTGTGGTGGA AAGAAGTAAA CACATGGCTC AGGAAAGATA TCCTGATGTA AAGGTGTACA AAAGTGTAGA AGAAATGCTC CAGGATGACA GCCTGGAACT GATCGTTGTA AACACGCCCA ACTATACACA CTACGAATAC ACCAAAGCTG CGCTGAATGC GGGCAAACAT GTGATCGTAG AAAAACCGTT CACCGTTGCA TCCGAAGAAG GACAGGAACT GGTGGAACTG GCCAAAAGCA AAGGTCTTTT ACTGAGCGTA TACCATAACA GACGTTTTGA TAGCGATTTC AAGATCGTAC AACAGGTGAT CAGCAGTGGT GACCTGGGTG ATATCCTGGA AGCAGAAATT CATTATGACC GCTACCGCGA AGAACTCAGT TACAAGAAAC ATAAAGAAGC GGCATTGCCA GGAACCGGCG GACTGTATGA CCTCGGATCT CACCTGGTAG ATCAGGCACT GCAACTGTTC GGCATGCCTG ACGGGATCTG GGCTGATATC CGTATCATCC GGAAAGAATC CCTGGTGGAC GATTATTTCG AACTGGTATT CTTCTACGAT AAACTGCGTG TTCGTTTAAA ATGCAGCTAC ATCACCAGAG AGCCTATTCC TTCTTATCAG TTCCATGGCC GTAAAGGTTC TTTCATTAAA ACAAAGGCTG ATACACAGGA AACAATGCTG CAACAGGGAC TCATGCCTGG CGCTCCTGGA TGGGGTATAG AAGGCATTCA TGAATGGGGT CTGATACACA CAGAGAAAGA CGGAGAAGTA ATCAGAAAAT ACCTGCCATC ACCAAAAGGT AATTACCTGG AATACTTTGA CGGTATGTAT GCCGCTATTG CAAACGGCGC ACCTGTACCG GTTCAGCCTA CTGATGCAGT CAATGTGATC CGTGTTATTG AAGCCGCATT TGAAAGCAGC AAAACCGGCA GTATCGTTAA ACTGTAA
|
Protein sequence | MEKIIKTGIC AYGMSGHVFH APFIHVHPGF AFTAVVERSK HMAQERYPDV KVYKSVEEML QDDSLELIVV NTPNYTHYEY TKAALNAGKH VIVEKPFTVA SEEGQELVEL AKSKGLLLSV YHNRRFDSDF KIVQQVISSG DLGDILEAEI HYDRYREELS YKKHKEAALP GTGGLYDLGS HLVDQALQLF GMPDGIWADI RIIRKESLVD DYFELVFFYD KLRVRLKCSY ITREPIPSYQ FHGRKGSFIK TKADTQETML QQGLMPGAPG WGIEGIHEWG LIHTEKDGEV IRKYLPSPKG NYLEYFDGMY AAIANGAPVP VQPTDAVNVI RVIEAAFESS KTGSIVKL
|
| |