Gene Cpin_1244 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1244 
Symbol 
ID8357360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1489667 
End bp1490536 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content45% 
IMG OID644963400 
Producthypothetical protein 
Protein accessionYP_003120943 
Protein GI256420290 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGGCCA CCCTGAAAGA GAAAGGTGCA CTCACCGTAG TACTGGTACT CATTGGCATG 
TTGCTGAACT GGGGGCTGGA AGCCCGTAAA TGGCAGCTGT TAGTCAGGCC GTTACAACAT
ATATCATTTC TTCGCGCTTT CAGCGCAGTG CTTTCCGGCG TCTCCTTTTC CATCAATACC
CCTAACCGTA TCGGTGAGTA TGGAGGAAGG GTACTATACC TCCGGAACAA CCGCAGCAAA
CTGAAAGGAA TTGCCGCTAC CATGGTCGGT AGCTTCAGTC AGCTGCTTGT CACTATTATT
TTTGGGTTAA CAGGTCTCTG CTACTATATC AACAAATTCC CGCTGGTAAA GGGAAATGGT
TATTTCGCCC CTCACTTCTG GGAGAAAATC CTGTTAGGAT TGCTAATAGT TATTTGCGCC
TTGGTCATAT TGTTATATTT TCGACTACAG ATCATCCTGG CGATATTTGA AAAGATCCCA
TTGTTGAGAA AAGCCCGGGT ATTTGTACAG ATCATTGTTC GTTACTCAGC CGGTGACCTT
GAACATTTAC TCCTGCTTTC AGCTGTCAGA TACGTAGTCT TCTCGGCACA GTATTTGATT
TTGCTTGACA CATTGGGCGT TGAGATGCTC TGGTGGCAAG GTTTTTTGAT GAATGCTGTT
GTTTATCTTG TAATGGCCCT GGTACCTACT ATCGCTATTG CGGAACTTGG ACTCAGAGGG
AAAGTCAGCC TGTACTTTAT GGGATTACTG AGTACCAATA GTCCGGGAAT TATCGCTGCC
ACTGTATGCA TCTGGGTAAT CAACCTGGTT TTGCCAGCCA TCTTAGGAAG TGTGTTGTTG
CTCGGAATAA AGATTTTTAA GGAAAAATAG
 
Protein sequence
MMATLKEKGA LTVVLVLIGM LLNWGLEARK WQLLVRPLQH ISFLRAFSAV LSGVSFSINT 
PNRIGEYGGR VLYLRNNRSK LKGIAATMVG SFSQLLVTII FGLTGLCYYI NKFPLVKGNG
YFAPHFWEKI LLGLLIVICA LVILLYFRLQ IILAIFEKIP LLRKARVFVQ IIVRYSAGDL
EHLLLLSAVR YVVFSAQYLI LLDTLGVEML WWQGFLMNAV VYLVMALVPT IAIAELGLRG
KVSLYFMGLL STNSPGIIAA TVCIWVINLV LPAILGSVLL LGIKIFKEK