Gene Cpin_1240 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1240 
Symbol 
ID8357356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1487152 
End bp1487625 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content44% 
IMG OID644963396 
Producttranscription elongation factor GreA 
Protein accessionYP_003120939 
Protein GI256420286 
COG category[K] Transcription 
COG ID[COG0782] Transcription elongation factor 
TIGRFAM ID[TIGR01462] transcription elongation factor GreA 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones41 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGGTA TAAACTACGT TACCAAAGAG ACCCTTGACC AGATGCGTGA GGAACTCAGT 
TTCCTGAAAA CCAAGGGCCG CGCAGAAATT GCCAGGGCTA TTGCGGAAGC AAGGGAAAAA
GGTGACCTCA AAGAAAATGC TGAATATGAT GCTGCAAAGG AAGCCCAGGG TATGCACGAA
GCAAAAGTGG CCATACTGGA GAGCGCTATT GCAACAGCAA GAATAGTAGA AGCAGATTCT
ATTGATACCT CTAAAGTATC CATATTGTGT AAGGTAACTA TTACAAATAT GGCTAATAAG
AAGACAGTTA CCTATCAGCT GGTTTCAGAG AAGGAGGCTG ATCTGAAACT GAACAAGATT
TCTGTGACAT CTCCTATCGG GAAAGGATTG TTAGGAAAGG CTGTAGGTGA GATCGCTGAT
GTGCATGCGC CTAATGGCAG CCTGAAGTTC AAGATCGAGA ACATCACTAT ATAA
 
Protein sequence
MSGINYVTKE TLDQMREELS FLKTKGRAEI ARAIAEAREK GDLKENAEYD AAKEAQGMHE 
AKVAILESAI ATARIVEADS IDTSKVSILC KVTITNMANK KTVTYQLVSE KEADLKLNKI
SVTSPIGKGL LGKAVGEIAD VHAPNGSLKF KIENITI