Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1238 |
Symbol | |
ID | 8357354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | + |
Start bp | 1485304 |
End bp | 1486053 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 644963394 |
Product | dimethyladenosine transferase |
Protein accession | YP_003120937 |
Protein GI | 256420284 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0030] Dimethyladenosine transferase (rRNA methylation) |
TIGRFAM ID | [TIGR00755] dimethyladenosine transferase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTATACAC TCAAAAAATC GCTGGGACAG CATTTCCTGA AGGATGAAAA TATCTGCAGG AAAATTGTGG AGGCATTACC TGTAAATCCC GGGCAGCAGA TAGTAGAAGT CGGCCCCGGA GCAGGCGCCA TCACCAAATA CCTGCTGCAG ATACCGGATG TTCACTTCAA GGCAGTAGAG CTGGACACTG AAAAGGTACA GTACCTGGAA AAGACCTATC CCGCTATTCA GGGCAAGATC ATCAATGAAA GTATTCTCGA TACCCCTGTT CCTTACCAGG GCGAGTTCAA TCTGATCGGC AATTTCCCTT ATAACATTTC TTCGCAGATC ATGTTCCGTG TCCTGGAATG GCGCCAGCAG GTACCTTCCG TGGTGGGTAT GTTCCAGAAG GAGGTAGCAT TGCGCATTGC GGCTACGAAA GGGAAGGAGT ATGGTATCCT GAGTGTGCTG ACACAGGCAT TTTACAAGGT GGAATACCTG TTTGAAGTGC ATGAGAACTG TTTTAATCCG CCGCCGAAGG TAAAATCCGC CGTTATCAGG CTGGACAGGC TGGAAACGTC GTATGATATC GCCAGTGAAC GGAAGTTTTT TGTGCTGGTA AAAACGGCTT TCGGACAGCG GCGCAAGCAG TTGCGTAATC CGTTAAAGGG TTTATTTGCT AAAGAAGTTT TGCAGGACAG CATTTTCAAC AAAAGAGCAG AAGAGTTGAG TGTGGCTGAT TTTGCAGCAT TATCCCATAA GATGTTATGA
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Protein sequence | MYTLKKSLGQ HFLKDENICR KIVEALPVNP GQQIVEVGPG AGAITKYLLQ IPDVHFKAVE LDTEKVQYLE KTYPAIQGKI INESILDTPV PYQGEFNLIG NFPYNISSQI MFRVLEWRQQ VPSVVGMFQK EVALRIAATK GKEYGILSVL TQAFYKVEYL FEVHENCFNP PPKVKSAVIR LDRLETSYDI ASERKFFVLV KTAFGQRRKQ LRNPLKGLFA KEVLQDSIFN KRAEELSVAD FAALSHKML
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