| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1215 |
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| Symbol | |
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| ID | 8357331 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | + |
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| Start bp | 1452848 |
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| End bp | 1455223 |
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| Gene Length | 2376 bp |
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| Protein Length | 791 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644963371 |
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| Product | protein of unknown function DUF214 |
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| Protein accession | YP_003120914 |
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| Protein GI | 256420261 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0577] ABC-type antimicrobial peptide transport system, permease component |
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| TIGRFAM ID | [TIGR03434] Acidobacterial duplicated orphan permease |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00000000164974 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTAAAA GTTATCTGAA AGCCACATTG CGCAGCCTCT GGAAAAACAA AACCTTCAGC
TTCCTGAATA TATTCGGTTT AGCAATAGGT ATTGTATGTG CGGGTGTTAT CTTCCTATGG
GTAGAAGATG AGCTGAATTA TGACAATGTG CATCTCAAAA AGGGTAGGCT GTATGAGGTG
ATGACCAACT CCGATTACGC CGGTGATATC CGTACATTCG GCTCTACGCC GGGATTGGCA
GGTCCGGCTA TCCGGGAGGA GATTCCGGGT ATCGTGAACA GTTGCCGTAT GACAGACTTT
TCACCTTCCT TCCTTTTTAA TACCGGTGAT AAACCCGTAT ATGCCAGCGG CAGATACGTC
GATGCCGCCT TCTTTTCCAT GTTCACTATT CCCTTTATAG AAGGAAACCC CGCTACTGCT
TTTAAAGAAC CATATTCCAT TGTTGTGTCG CAACAGGCAG CCAGAAACAT CTTTGGTGAT
GATAAGAATA TTGTAGGAAG AAGGGTGAAA GTAGACAACA AACAGGAATT CCTGGTAAGC
GGTGTGATGA AAGATCAACC GGAAAACAGC TCATTTCGTT TTGAATGGGT GGCATCATTT
GACCTCTTTT TTCAGCAGAA TAAAGCTTCG TTGTCTGTAT GGGCCAACTG TTCTCCTTTG
ACATTCGTAG AACTGAGTCC GCGTGCAGAT GTAGCGGCGA TTAATAAACA ACTCTATCCT
TTCGTACAGC GCAGGTCGAA AGAAACCAAC AATCATTTGT TTTTATTCAG TATGAATGAC
TGGCGCTTGT ATAACAAATT TGATAACGGT AAGCAGGCGG GAGGCCGTAT TACCTATGTC
CGCATGTTTT CCATACTGGC CTGGATTATC CTGTTGATCG CGTGTATCAA TTTTATGAAT
CTGGCTACGG CCCGTAGTGA AAAACGTGCA AGAGAAGTGG GTGTACGTAA GGTAATGGGT
GCAGATAAGA AAGGGCTGGT GATGCAGTTT ATTGGTGAAG CAATTCTGAT GGCAGCAGCA
GGTTGTGCGC TGGCGGTATT ATTGCTGGCG CTGATATTGC CTGTTGCAGG ACCATTGCTG
GGTAAGACCC TCGTGGTAGG ATTAGGTAAT CCTGTACATA TTGCAGCTCT GCTTGTTGTG
ACCTTGCTCT GTGGATTGAT CGCCGGTAGT TATCCGGCTT TTTATCTTTC TTCTTTCAAC
CCGGTTAGTG TATTGAAAGG CGCTAATCTG AAACTGGGCG GAGCCGGTTT TATCAGAAGA
GGGCTGGTGG TATTACAGTT CTCTGTATCT ATCATCCTGA CTGTTTGCAC GGTGGTGATC
TATCAACAGA TACATTATGT CAAGAGTCGT GACATCGGCT TTCAGAAGGA GCGCCTGATC
AGCATAGATC TGAAGGGAGA TATGCTGAAT CGCTATGATG CTATCAAACA GGAATTGCTG
AGAACAGGGG TAGTAGAAAA TATTGGCTTG TCAGATCATC CTACCCTGTA TGACGGGAAT
AATACCAGTT CGCTGAGCTG GCAGGGAAAA CCTGAAAACA GTGACCTGGT GGTGTCAACA
AGACTGGCTA GTCCCGGTTT TTTTAATACC ATGGGGATGC AGCTGATAGA TGGAAAAGAC
TTTAATGAAG GAAGCACGGA TAAATTATCA GTTGTCATTA CAGCTGCGCT GGCTAAAAAG
ATGGGCACAG GCAGTGCAAT CGGTAAAACG ATAGAGATGA CTACGGATGA TGGTGCTCCT
CTGTTCCTGA CGGTGACAGG GGTGGTGAAA GACTATGTTT ATGGCAACAT GTATGGCACC
TCTGATCCGG TATTGTTTTA TAATATGCCG CAGGTAGCCA ATGTGATGTA TCTGCGTCTG
AAAGCTTCTG TCGCGCCGGA GAAAGCCATA GCGGCGATTG AAAAAGTTAT TACAGCGGCG
AGTCCGGCTT ATCCTTTTGG CTATACTTTC GTAGACGATC AGTTCGATAA TATGTTTCAG
TCGGAAATGC TGGTAAACCG CTTATCCCGC GTATTTGCGA TATTGGCGCT GATTATCTCC
TGTCTTGGAT TGTTTGGGCT GGCGGCTTAT ACTGCCGAGC GAAGAACAAG AGAGATCGGT
ATCAGAAAAG TATTGGGGGC CAGTGTCGCC AGTATCACTA CCTTATTATC CGGAGAGTTC
CTGAAGCTGG TGCTGATTTC CTGTGTAGTT GCATTCCCCT TTGCCTGGTG GGCGATGTCA
GTCTGGTTAC AGCAATATGC CTACCGGGTA GCGATACAGT GGTGGGTATT TCTGCTGGCA
GGACTGGCGG CAGTGGCGAT CTCTTTACTG ACTATCAGTT TCCAGTCGGT AAAGGCGGCG
CTGATGAATC CTGTGAAGAG TCTCCGGGCA GAATAG
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| Protein sequence | MFKSYLKATL RSLWKNKTFS FLNIFGLAIG IVCAGVIFLW VEDELNYDNV HLKKGRLYEV
MTNSDYAGDI RTFGSTPGLA GPAIREEIPG IVNSCRMTDF SPSFLFNTGD KPVYASGRYV
DAAFFSMFTI PFIEGNPATA FKEPYSIVVS QQAARNIFGD DKNIVGRRVK VDNKQEFLVS
GVMKDQPENS SFRFEWVASF DLFFQQNKAS LSVWANCSPL TFVELSPRAD VAAINKQLYP
FVQRRSKETN NHLFLFSMND WRLYNKFDNG KQAGGRITYV RMFSILAWII LLIACINFMN
LATARSEKRA REVGVRKVMG ADKKGLVMQF IGEAILMAAA GCALAVLLLA LILPVAGPLL
GKTLVVGLGN PVHIAALLVV TLLCGLIAGS YPAFYLSSFN PVSVLKGANL KLGGAGFIRR
GLVVLQFSVS IILTVCTVVI YQQIHYVKSR DIGFQKERLI SIDLKGDMLN RYDAIKQELL
RTGVVENIGL SDHPTLYDGN NTSSLSWQGK PENSDLVVST RLASPGFFNT MGMQLIDGKD
FNEGSTDKLS VVITAALAKK MGTGSAIGKT IEMTTDDGAP LFLTVTGVVK DYVYGNMYGT
SDPVLFYNMP QVANVMYLRL KASVAPEKAI AAIEKVITAA SPAYPFGYTF VDDQFDNMFQ
SEMLVNRLSR VFAILALIIS CLGLFGLAAY TAERRTREIG IRKVLGASVA SITTLLSGEF
LKLVLISCVV AFPFAWWAMS VWLQQYAYRV AIQWWVFLLA GLAAVAISLL TISFQSVKAA
LMNPVKSLRA E
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