Gene Cpin_1210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1210 
Symbol 
ID8357326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1442662 
End bp1443693 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content44% 
IMG OID644963366 
Producthypothetical protein 
Protein accessionYP_003120909 
Protein GI256420256 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000000233215 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
TTGCAGCATA TATCAAAAAA GAAGGCTTTT TTCCCGCTGA ATCCTTCATT CAGAGGGTAT 
CTTAAATTAT ACGAACGAGA GGTAAAATTA CCTGTCTCTT ACGAGGAGAT GCGTTATTTT
GATAACAGCA TTCCGGTATA CGATAAGGAT GGAAAGGACA CCCTATGGGA GTCAGTTTTT
TATCCGCAGA GTATGCATCA GCAATTGCAC GCGGGCCTGA AGAGGATTTA TTCTATTATG
AAAGCAGGGG GTGATTTCAC CGCGGAGGAA CACCTGGAAG TGGAGCGTAT TGATTTCTGC
ACCTTTGGTA ATTCCCATCC TTTCCGTATC AGGATACGTA ACACATACAA TGACGTGTAT
GACTACTTCT ATATAAAAGT GGCAGATGCT TCCCGTATTT ACGGCCTGGA GCTGGAACAC
ATCTTATCTC CTTACGTGAT CAATTTTATT GTTGATGGCA ATACGCTGAT CGAAGAGCAT
ATTGCCGGCG TACCTGGCGA TCAGTTTATC GTACAGTATA TGAACCGGCC GGAGTTTAAC
CCTAAACGTA TTGCCAAGGA ATTCGTCAAG TTCAATGAGC GTTGTTTTGT ACGCTTACTG
GGAGACATGC GTTCCTACAA TTTCGTATTT GACATTACCC AGGATTTTGA CGATGTACAA
TTCCGGATCA GGGCAATCGA TTTTGACCAG CAGTTCTATG AAGGCAAACG TACCTTATAT
ATGCCACAGT TTTTCAAGGA GAACAGGGTA TTTGTGGAAC TGGCGATGAA ACACCTGAAT
GCGGAGGTAG TAAAGCAGTA CCAGCAGGAG GAACGTTCTG TTATTGCCCG CAGGATCAAA
ACCCAACGGC ATCGCATAAA GGACCTGAGA GACGTGATCA TGACGGACCG GGTGTCCTTT
CCCGAAAAAA TAAGTCAGCT GGGGCATGAA CTGGCAGAGT ACTATGACGA TGCTGTCTTT
TCACGTTGTA AGACAATGGG TGAGATCATC GAACGTAGTC TGAAGCGCCT GCTGGTGAAA
AGTCTTAAAT AG
 
Protein sequence
MQHISKKKAF FPLNPSFRGY LKLYEREVKL PVSYEEMRYF DNSIPVYDKD GKDTLWESVF 
YPQSMHQQLH AGLKRIYSIM KAGGDFTAEE HLEVERIDFC TFGNSHPFRI RIRNTYNDVY
DYFYIKVADA SRIYGLELEH ILSPYVINFI VDGNTLIEEH IAGVPGDQFI VQYMNRPEFN
PKRIAKEFVK FNERCFVRLL GDMRSYNFVF DITQDFDDVQ FRIRAIDFDQ QFYEGKRTLY
MPQFFKENRV FVELAMKHLN AEVVKQYQQE ERSVIARRIK TQRHRIKDLR DVIMTDRVSF
PEKISQLGHE LAEYYDDAVF SRCKTMGEII ERSLKRLLVK SLK