| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1206 |
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| Symbol | |
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| ID | 8357322 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chitinophaga pinensis DSM 2588 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013132 |
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| Strand | - |
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| Start bp | 1435750 |
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| End bp | 1436322 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644963362 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_003120905 |
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| Protein GI | 256420252 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.000221886 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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| |
Sequence |
| Gene sequence | ATGTACAAAC TAAGTGATGA GCAGCTAATT ACCCTCTTCA AAAAGGGTCA CGCTTCGGCA
TTGGAAGAAT TAGTGCACAG ACACAAAGAT AAGCTCTATA CCTCTATCGT ATTACTTGTG
AAAGACGCTT TCCTGGCAGA AGACATTTTC CAGGATACCT TTATAAAGAT TATAGATACT
ATCAGAGCTG AACGCTATAC GGAAAAAGGA AAATTCCTCC CCTGGGCGAT GCGTATTGCA
CATAACCTGT GTGTGGATCA CTTCCGTAAA ATCAAGCGTA CTCCTATCAT CAAGACCAGC
GACGACAAAG ATATTTTCAA CGTATTGAAT TTCAGCGAGA GCAGTGCAGA AGAAAAAATG
ATCACGGCAC AGAGCCACGA TCGTGTAAGA CGTATGCTCG ACCTGCTGCC GGAAGAACAG
CGTGAGGTGA TCATCCTCCG CCACTACGCA GACCTCAGTT TCAAAGAAAT TGCCGATCTC
ACCCAGGTGA GCATCAATAC CGCATTGGGC CGTATGAGAT ATGGTCTGAT AAATCTCCGG
AAGATGATGA CGGAGAAACA GATTTGTTTG TAA
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| Protein sequence | MYKLSDEQLI TLFKKGHASA LEELVHRHKD KLYTSIVLLV KDAFLAEDIF QDTFIKIIDT
IRAERYTEKG KFLPWAMRIA HNLCVDHFRK IKRTPIIKTS DDKDIFNVLN FSESSAEEKM
ITAQSHDRVR RMLDLLPEEQ REVIILRHYA DLSFKEIADL TQVSINTALG RMRYGLINLR
KMMTEKQICL
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