Gene Cpin_1198 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1198 
Symbol 
ID8357314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1426144 
End bp1427781 
Gene Length1638 bp 
Protein Length545 aa 
Translation table11 
GC content47% 
IMG OID644963354 
Productadenine deaminase 
Protein accessionYP_003120897 
Protein GI256420244 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG1001] Adenine deaminase 
TIGRFAM ID[TIGR01178] adenine deaminase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.132796 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT CCTTTCAGAT ATCCGGTAAC CTGATAGATA TCCTGCAACA AAAGATCTAT 
CCGGCTACCG TTACCGTTGA AAACGGCCGT ATCGCCCGTA TTACAGAAGA CGCAACGACA
CATGAACAGT ACCTGCTGCC TGGTTTTGTA GATGCACATG TGCACGTAGA AAGCTCTATG
CTGACGCCCT CACAATTCGC CAGACTGGCC GTTGTACATG GTACCATAGC TACGGTTTCA
GATCCGCACG AAATAGCGAA CGTACTGGGT GTACAGGGTG TTGAATACAT GCTGGAAAAC
GGGAAGACCG TTCCCTTTAA GTTCTGCTTC GGCGCGCCTT CCTGCGTACC CGCAACCATC
TTTGAAACAG CAGGTGCTGA AGTCACAGTT GCGGATGTAG AAGCATTACT GCAAAAACCG
GAAGTACTTT ATCTCACAGA GATGATGAAC TTCCCCGGCG TACTGCATGA ACAGGCAGAT
GTAATGGAGA AGATTGCAGC GGCAAAACGT ATCGGTAAAC CTGTTGATGG ACATGCACCT
GGTCTGCGGG GCGAAGACGC AAAAAAGTAT ATCGCTGCCG GCATCAGTAC AGATCACGAA
TGTTTTACCG CAGCGGAAGC ATTAGACAAA CTGCAATACG GTATGCATAT CCTGATCAGA
GAAGGCAGTG CTGCTCGCAA CTTCGACGCG CTCATACCAC TGTTACAGGA TCATCCTGAA
AAGATCATGT TCTGTAGTGA TGATAAGCAC CCGGATAATC TTGTAGAAGG ACATATCGAT
GCACTGGTAA GAAGAGCATT GGCATTAAAG ATTGATCTGT TTAAAGTACT GCGTGCGGCC
TGTGTGAATC CGGTATTACA TTACAAGATA CCTGCCGGAT TATTACGCGT AGGCGATCCT
GCTGACTTTA TCGTGGCAGA TCATCCCGAC ACATTCAACA TCAAGGCAAC TTATATCAAC
GGTCAGCTGG TCGCCCAAAA CGGAGAAACA TTGATCCCTT CTGTCATTGC ACCGGTGATT
AACAACTTTG CCTGTACACC AAAATCAACA AGCGATTTTC GTATTACCGC TGACGGTATT
ACGGCGAAAG TAAAAGTGAT AGAAGCGCTC GACGGACAAC TGATCACCAA TAGTTTTACA
GAGACATTGC CTGTTGTGGA CAATCAGTTA TTCTCTTCAA CAGAAAAAGA CATACTGAAA
CTGGCGGTCG TAAACCGTTA CCAGGAAGCG CCTGTCGCAT TGGGCTTCAT CAGGAACTTT
GGTTTTAAAC AGGGCGCTAT TGCTTCATCC GTTGCGCATG ACAGCCATAA TATCATCGTA
GTCGGCGTAG ATGATGAAAG CATCGCAGAG GCAGTCAATG CAGTCATTAC ACATAAGGGC
GGTGTAAGTG TAGTGAGCAA TAGTGAAGTG AGCATATTGC CGTTGCCTGT TGCCGGGTTA
ATGAGCAACT TAGATGGTTA TGAAGTAGCG GCACAATACA GTCAGCTGGA CAAAGCGGCG
AAAGCACTGG GAAGCAAACT GGATGCGCCT TTCATGACAT TATCATTCAT GGCGCTGCTG
GTTATTCCGC ATCTGAAACT GAGTGACAAG GGATTGTTTG ACGGAGATCA TTTCAGCTTT
ACAGCAGCTA TCTTATAG
 
Protein sequence
MSTSFQISGN LIDILQQKIY PATVTVENGR IARITEDATT HEQYLLPGFV DAHVHVESSM 
LTPSQFARLA VVHGTIATVS DPHEIANVLG VQGVEYMLEN GKTVPFKFCF GAPSCVPATI
FETAGAEVTV ADVEALLQKP EVLYLTEMMN FPGVLHEQAD VMEKIAAAKR IGKPVDGHAP
GLRGEDAKKY IAAGISTDHE CFTAAEALDK LQYGMHILIR EGSAARNFDA LIPLLQDHPE
KIMFCSDDKH PDNLVEGHID ALVRRALALK IDLFKVLRAA CVNPVLHYKI PAGLLRVGDP
ADFIVADHPD TFNIKATYIN GQLVAQNGET LIPSVIAPVI NNFACTPKST SDFRITADGI
TAKVKVIEAL DGQLITNSFT ETLPVVDNQL FSSTEKDILK LAVVNRYQEA PVALGFIRNF
GFKQGAIASS VAHDSHNIIV VGVDDESIAE AVNAVITHKG GVSVVSNSEV SILPLPVAGL
MSNLDGYEVA AQYSQLDKAA KALGSKLDAP FMTLSFMALL VIPHLKLSDK GLFDGDHFSF
TAAIL