Gene Cpin_1175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1175 
Symbol 
ID8357291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1397551 
End bp1398366 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content45% 
IMG OID644963331 
ProductIntegral membrane protein TerC 
Protein accessionYP_003120874 
Protein GI256420221 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0861] Membrane protein TerC, possibly involved in tellurium resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATCG CTGAAATGTT CCAGCAGATC ATGGATAACC CGATCCCGGC GTTACTGATC 
GTTGGAAACC TGATTATTAT TGAAAGCCTG TTGTCGGTGG ATAATGCGGC TGTACTGGCT
ACAATGGTAA TGGACCTGCC TAAGGATCAA CGTAACAGAG CCCTGAAATA TGGTATTATC
GGAGCTTACG TCTTCCGTGG TATCTGTCTG CTGTTTGCGT CTCTCCTCAT TAAAGTATGG
TGGCTGAAAC CAATCGGTGG TCTTTATCTC CTGTACCTGA CCTTTGACTA TTTTAAAAAG
AAAGCAGAGA AGTCCCGGGC TGAAAAAGCT GGCGTTGTAG AAGAAGAAGC GGAGGAAATT
GACAAAAGCC AGAACTGGTT GTATAAATCT ACTATCGGCT GGATGGGTCA GTTCTGGGCT
ACAGTAGCGC TGGTAGAAAT TATGGACCTC GCTTTCTCTA TCGATAACGT ATTTGCAGCA
GTTGCGTTCA GTGATAATAT CGTACTGATC TGGACCGGCG TATTTATCGG TATCCTGGCG
ATGCGTTTTG TAGCGCAGGG TTTCGTACGT CTGATGGAAA AGTATCCTTT CCTGGAAACA
GCCGCATTCC TGGTAATCGG TGTACTGGGT ATCAAACTGA TGCTGGCTAT TTACGAACAT
TTCTTCCCGG AAACAGCTGC TTCCAAATTC CTGGAAAGCC ATGAAGCTGA CTGGGCGACT
TCCATCATCA CAGTGTCTAT CTTCCTGATT CCTATCATCA CAAGTGCACT GTTCAACTAC
CCTAAAAAAC ATAAGGTAGA AGCAAAAGCT GAATAG
 
Protein sequence
MQIAEMFQQI MDNPIPALLI VGNLIIIESL LSVDNAAVLA TMVMDLPKDQ RNRALKYGII 
GAYVFRGICL LFASLLIKVW WLKPIGGLYL LYLTFDYFKK KAEKSRAEKA GVVEEEAEEI
DKSQNWLYKS TIGWMGQFWA TVALVEIMDL AFSIDNVFAA VAFSDNIVLI WTGVFIGILA
MRFVAQGFVR LMEKYPFLET AAFLVIGVLG IKLMLAIYEH FFPETAASKF LESHEADWAT
SIITVSIFLI PIITSALFNY PKKHKVEAKA E