Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1163 |
Symbol | |
ID | 8357279 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1387103 |
End bp | 1388014 |
Gene Length | 912 bp |
Protein Length | 303 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 644963319 |
Product | ABC transporter related |
Protein accession | YP_003120862 |
Protein GI | 256420209 |
COG category | [V] Defense mechanisms |
COG ID | [COG1131] ABC-type multidrug transport system, ATPase component |
TIGRFAM ID | [TIGR03522] gliding motility-associated ABC transporter ATP-binding subunit GldA |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAATCA CAGTAACACA GTTAAGCAAG GTATACGAAG AGCAGCGGGC AGTCAATGAT ATTTCCTTCT CGCTGAATAA AGGCGAGGTA GTGGGTTTTC TGGGTCCTAA CGGGGCCGGC AAGAGCACTA CCATGAAGAT GATCACCGGC TACCTGCCTC CGAGTGGCGG TAATGCCAGC GTATGCGGCT ATGATGTAGT GACGCATCCT ATGGAAGTCA GACAGCGTAT CGGCTACCTG CCGGAAGCCA ATTCTCTCTA TAAAGACATG TACGTCCGGG AGTTCCTCAG CTTTATCGCT GAAGTACATA AACTGGGCAG TAATAAGGAA AAACGCATTT CCGAAGTGAT CGCTATGACC GGTTTACAGC CGGAAAGCAA GAAAAAGATC GGGCAGTTGT CCAAAGGGTA CCAGCAGCGT GTTGGTTTGG CCCAGGCACT GATACATGAT CCGGAAGTGC TGATCCTGGA CGAGCCAACC TCCGGTTTCG ATCCCAACCA GCTGGTAGAT GTGCGCGATC TGATCAGGGA ACTGGGTAAA ACCAAGACCA TCATGCTCAG CACACACATC ATGCAGGAAG TAGAAGCCAT GTGCAGCCGG GTTATCATCA TCAATAAGGG TAACATTATT GCGGACGATT CCCTCCAGAA CCTGCAACAA GGCGACCAGC AAAATGGTTA TATCCAGGTA TCTTTCGGCG CACCGCTTCC TGCAGAGGCG GAGCTGTTGC AGATACCGGG CGTAACGCGG GTAAAACAGC AGGACGGCGG TACATGGCAG TTATTTGCCG CTAATCTGGA AGATGTACGC AAAAACCTGC TACAATTTGC TTTGATAAGT AACCGGAACA TCCTTTCTTT GCAGAGCAAT TCACAAAGCC TGGAGTCAAT CTTCAGGGAA TTGACAAAGT AG
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Protein sequence | MSITVTQLSK VYEEQRAVND ISFSLNKGEV VGFLGPNGAG KSTTMKMITG YLPPSGGNAS VCGYDVVTHP MEVRQRIGYL PEANSLYKDM YVREFLSFIA EVHKLGSNKE KRISEVIAMT GLQPESKKKI GQLSKGYQQR VGLAQALIHD PEVLILDEPT SGFDPNQLVD VRDLIRELGK TKTIMLSTHI MQEVEAMCSR VIIINKGNII ADDSLQNLQQ GDQQNGYIQV SFGAPLPAEA ELLQIPGVTR VKQQDGGTWQ LFAANLEDVR KNLLQFALIS NRNILSLQSN SQSLESIFRE LTK
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