| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpin_1162 |
|---|
| Symbol | |
|---|
| ID | 8357278 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chitinophaga pinensis DSM 2588 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013132 |
|---|
| Strand | - |
|---|
| Start bp | 1385735 |
|---|
| End bp | 1387027 |
|---|
| Gene Length | 1293 bp |
|---|
| Protein Length | 430 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644963318 |
|---|
| Product | enolase |
|---|
| Protein accession | YP_003120861 |
|---|
| Protein GI | 256420208 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0148] Enolase |
|---|
| TIGRFAM ID | [TIGR01060] phosphopyruvate hydratase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.903735 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 0.85465 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACCA TTTCATCAAT CCATGCAAGG CAGATCCTTG ATAGCCGTGG CAATCCAACT
GTAGAGGTAG ATGTAACCAC AGAAGACGGT CACTTTGGCC GTGCAGCCGT TCCATCCGGT
GCTTCTACTG GTAAACACGA AGCAGTTGAA CTGCGTGATA ATGACAAAGC CGTGTACATG
GGTAAAGGTG TTATCCAGGC AGTAAACAAC GTGAACGATA TTATTGCAGA AGAACTGGTA
GGATGGGAAG TGACAGACCA GGCCGGTATC GATAGATTCC TGATTGAACT GGATGGTACT
GAAAATAAAG GTAAACTGGG TGCTAACGCT ACCCTGGCTG TGAGCATGGC CGTTGCAAAA
GCAGCTGCTG ACGAAGCTAA CCTGCCACTG TACCGTTACC TGGGTGGTGT TAACGCTACT
ACCCTGCCTA TTCCGCTGAT GAACATCATC AATGGTGGTG TGCACGCTGA TAACAAAATC
GATTTCCAGG AATTCATGAT CGTTCCGGTA GGTGCGTCTT CCTTCTCTGA AGGTCTGCGC
TGGGGTGTTG AGGTGTTCCA TCACCTGAAA TCCGTTCTGA AAAAGAAAGG TTACAGCACT
AACGTAGGTG ACGAAGGTGG TTTCGCACCA GAAATCCAGA GCAACGAAGA AGCGATCGAA
ACTGTAATCG CAGCTATCGA AGCAGCTGGT TACAAACCAG GTGAGCAGAT CGCTATCGCA
CTGGACGCAG CAAGCAGCGA AATGTTCAAT GACGCTGATA AAACTTACAA ATTCTACAAA
AGCTCCGGAA AAGTAATCAG CAGCGAAGAA ATGGTTGCTT TCTGGGCTGA GTGGTGCAAA
AAATACCCAA TCGTTTCTAT CGAAGACGGT ATGGCTGAAG ATGACTGGGA TGGCTGGAAA
AAACTAACTG AAGCTGTTGG TGCTACCGTA CAGCTGGTAG GTGATGACCT GTTCGTTACC
AACGTTAAAC GTTTGAAAAC AGGTATCGAC CAGAGCATCG CTAACAGCAT CCTGATCAAA
GTAAACCAGA TCGGTACTGT TACTGAAACA ATTGATGCAG TGAATATGGC TCACAAAGCA
GGTTTTACCT CTATCATGAG TCACCGTTCC GGCGAAACTG AAGATACTAC CATCGCTGAC
CTGGCAGTTG CACTGAACTG TGGCCAGATC AAAACCGGTT CCGCTTCCCG TACTGACCGT
ATGGCTAAAT ACAACCAGTT GCTCCGTATC GAAGAAGAAT TGGACAACGT TGCGTATTAT
CCGGGAAAAT CCGTTAAATT TGGTAAGAAG TAA
|
|---|
| Protein sequence | MSTISSIHAR QILDSRGNPT VEVDVTTEDG HFGRAAVPSG ASTGKHEAVE LRDNDKAVYM
GKGVIQAVNN VNDIIAEELV GWEVTDQAGI DRFLIELDGT ENKGKLGANA TLAVSMAVAK
AAADEANLPL YRYLGGVNAT TLPIPLMNII NGGVHADNKI DFQEFMIVPV GASSFSEGLR
WGVEVFHHLK SVLKKKGYST NVGDEGGFAP EIQSNEEAIE TVIAAIEAAG YKPGEQIAIA
LDAASSEMFN DADKTYKFYK SSGKVISSEE MVAFWAEWCK KYPIVSIEDG MAEDDWDGWK
KLTEAVGATV QLVGDDLFVT NVKRLKTGID QSIANSILIK VNQIGTVTET IDAVNMAHKA
GFTSIMSHRS GETEDTTIAD LAVALNCGQI KTGSASRTDR MAKYNQLLRI EEELDNVAYY
PGKSVKFGKK
|
|---|
| |