Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1158 |
Symbol | |
ID | 8357274 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1383408 |
End bp | 1384124 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644963314 |
Product | hypothetical protein |
Protein accession | YP_003120857 |
Protein GI | 256420204 |
COG category | [S] Function unknown |
COG ID | [COG3361] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.807255 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGAAAAC CCTTTCTGAC AGCAGCCTGG CGTAACCTCC TCATGATCAA TTTTGAGGCT GATCCAGCTG TACTGCAGCC ACTTGTGCCT TATAATACCG AACTCGATAC CTGGAACAAT ACACTATATA TCAGCCTGGT AGGCTTCCTC TTTAAAAATA CCCGTGTAAA AGGACTTTCC CTCCCCTTCC ATCGCGATTT TGAAGAAGTC AACCTCCGTT TCTATGTCCG CTACAAAGAA GACGGCAGCT GGAAAAGAGG CGTCGTATTC GTAAAAGAGA TCGTCCCTAA ACATATGATC ACTTTTGTAG CTAATACAGT ATATAAAGAG AAATACGCAA TCCATCCGAT GCGCCATCAA TGGCAGCATA CACCCGATAA CCTGTTGCAG GTCAGCTATG AATGGAAAGT GAAACAGGAC TGGAATTTTG TAAAAGCAAC TGCCGAAAAA GAAGCCCTCC CTATTACACC TGGCAGCGAG GCTGAATTTA TTACAGATCA TTACTGGGGG TATACACAGA TGGCGGCTGC ACGTACAGGA GAATATCAGG TCAGCCATCC ACAATGGCGC ACACACCGGA TCATTGATTA CAGCTACCGC TGTAACACAG CTGCTCTATA CGGACCTGCT TTTGTTCCTA TGTTGCAGCA GGCGCCGGTA TCCGCATTAC TGGCGGAAGG CTCAGATATC AGTGTCATGC CGAAAAAATT GCTGTAA
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Protein sequence | MGKPFLTAAW RNLLMINFEA DPAVLQPLVP YNTELDTWNN TLYISLVGFL FKNTRVKGLS LPFHRDFEEV NLRFYVRYKE DGSWKRGVVF VKEIVPKHMI TFVANTVYKE KYAIHPMRHQ WQHTPDNLLQ VSYEWKVKQD WNFVKATAEK EALPITPGSE AEFITDHYWG YTQMAAARTG EYQVSHPQWR THRIIDYSYR CNTAALYGPA FVPMLQQAPV SALLAEGSDI SVMPKKLL
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