Gene Cpin_1158 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1158 
Symbol 
ID8357274 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1383408 
End bp1384124 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content46% 
IMG OID644963314 
Producthypothetical protein 
Protein accessionYP_003120857 
Protein GI256420204 
COG category[S] Function unknown 
COG ID[COG3361] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value0.807255 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAAAC CCTTTCTGAC AGCAGCCTGG CGTAACCTCC TCATGATCAA TTTTGAGGCT 
GATCCAGCTG TACTGCAGCC ACTTGTGCCT TATAATACCG AACTCGATAC CTGGAACAAT
ACACTATATA TCAGCCTGGT AGGCTTCCTC TTTAAAAATA CCCGTGTAAA AGGACTTTCC
CTCCCCTTCC ATCGCGATTT TGAAGAAGTC AACCTCCGTT TCTATGTCCG CTACAAAGAA
GACGGCAGCT GGAAAAGAGG CGTCGTATTC GTAAAAGAGA TCGTCCCTAA ACATATGATC
ACTTTTGTAG CTAATACAGT ATATAAAGAG AAATACGCAA TCCATCCGAT GCGCCATCAA
TGGCAGCATA CACCCGATAA CCTGTTGCAG GTCAGCTATG AATGGAAAGT GAAACAGGAC
TGGAATTTTG TAAAAGCAAC TGCCGAAAAA GAAGCCCTCC CTATTACACC TGGCAGCGAG
GCTGAATTTA TTACAGATCA TTACTGGGGG TATACACAGA TGGCGGCTGC ACGTACAGGA
GAATATCAGG TCAGCCATCC ACAATGGCGC ACACACCGGA TCATTGATTA CAGCTACCGC
TGTAACACAG CTGCTCTATA CGGACCTGCT TTTGTTCCTA TGTTGCAGCA GGCGCCGGTA
TCCGCATTAC TGGCGGAAGG CTCAGATATC AGTGTCATGC CGAAAAAATT GCTGTAA
 
Protein sequence
MGKPFLTAAW RNLLMINFEA DPAVLQPLVP YNTELDTWNN TLYISLVGFL FKNTRVKGLS 
LPFHRDFEEV NLRFYVRYKE DGSWKRGVVF VKEIVPKHMI TFVANTVYKE KYAIHPMRHQ
WQHTPDNLLQ VSYEWKVKQD WNFVKATAEK EALPITPGSE AEFITDHYWG YTQMAAARTG
EYQVSHPQWR THRIIDYSYR CNTAALYGPA FVPMLQQAPV SALLAEGSDI SVMPKKLL