Gene Cpin_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpin_1156 
Symbol 
ID8357272 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChitinophaga pinensis DSM 2588 
KingdomBacteria 
Replicon accessionNC_013132 
Strand
Start bp1380794 
End bp1381984 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content48% 
IMG OID644963312 
Productoxidoreductase domain protein 
Protein accessionYP_003120855 
Protein GI256420202 
COG category[R] General function prediction only 
COG ID[COG0673] Predicted dehydrogenases and related proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.741439 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACGTA TTTCCATGTT AGGTTCCGGC TTTATCGGCC GCTTCTATGC AGACTCCTTA 
CAGGGACAGA GAAGCCGGGA CAAGATTGTC AGCATCTATT CGCGCAGAGA AGAGAGTGCG
AAGAAATTTG CAGAAGACTA TAATGTCGCT CACTGGACTA CGGATATGGA AGCATCCATT
GCACATCCGG ATGTGAATGT GGTTTGTATT TCCCTTCCTA ATAACCTGCA CGAAGCAGCA
GTAGCACTCT GCTGTAAACA CAAGAAAGGC GTCATCTGTA CCAAGCCCCT GGGCCGTAAT
GCAGAAGAAG CGAAACGTAT GCTGGAAATG GTAGAAGCTG CCGGTATCTT CAACGGCTAT
CTCGAAGACC TGGTATACAC CCCGAAATTC CTGAAAGCAC TGGATAGCGT TAAAAGTGGC
GCTTTGGGAC GTATTCTCTG GGCTAAATCC AGGGAAACAC ACCCCGGCCC GCACAGCGAA
TGGTTCTGGG ATAAAGAACA GGCAGGTGGT GGCTGTATCC TCGACCTGGG ATGCCATTGC
GTAGAGATTG CACGTAGCTT TATCGGAAAA GATATCAAAC CGGTAGAAGT AATGTGCTGG
GCAGATACAC AGGTAAAACC CATCGATGCA GAAGACCATG CAATTGGTCT GGTGAAATAT
GAAAATGGCG CTATCGGGCA GTTTGAAGTA AGCTGGACAT TCCGCGGCGG ACTTGACCTG
CGCGATGAAG TAATGGGTAC TGAAGGTACT ATCTGGTTAA ACAGCTTCCT GCGTACCGGC
TTTGATATGT TCACAACCGG TAAAGGCGCT GATTATGTAG CAGAAAAGGC AGAAAGTAAC
AGTGGCTGGC TATTCCCGGT AGGTGATGAA CTGAATGAGC TGGGCTATAA CCACATGTTT
GCTGATATGT TCAATGCAAT TGAAAGCAAT CAGCCTGCAC GGGAAACATT CTATGACGGA
TATGTAGTGA ACGCTGTACT GGATGCTGCT TACCGCAGCG CTGCCAGCAA ACAGTGGGAA
CCTGTAAAGC TGGATATTTG GCGTGGTCAG ACTGGCTTAA CGAAACCACA GACACTGGTA
GACTACGATG CTGATCATTA CCTGGTGAAA GAAGAGATGA CCCACTTCGG CGCCAAGAAA
CTCATCCTGA AAGAGAAGAA AACAGGGCAG ATCATTGAAC GTACGATATA A
 
Protein sequence
MQRISMLGSG FIGRFYADSL QGQRSRDKIV SIYSRREESA KKFAEDYNVA HWTTDMEASI 
AHPDVNVVCI SLPNNLHEAA VALCCKHKKG VICTKPLGRN AEEAKRMLEM VEAAGIFNGY
LEDLVYTPKF LKALDSVKSG ALGRILWAKS RETHPGPHSE WFWDKEQAGG GCILDLGCHC
VEIARSFIGK DIKPVEVMCW ADTQVKPIDA EDHAIGLVKY ENGAIGQFEV SWTFRGGLDL
RDEVMGTEGT IWLNSFLRTG FDMFTTGKGA DYVAEKAESN SGWLFPVGDE LNELGYNHMF
ADMFNAIESN QPARETFYDG YVVNAVLDAA YRSAASKQWE PVKLDIWRGQ TGLTKPQTLV
DYDADHYLVK EEMTHFGAKK LILKEKKTGQ IIERTI