Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpin_1156 |
Symbol | |
ID | 8357272 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chitinophaga pinensis DSM 2588 |
Kingdom | Bacteria |
Replicon accession | NC_013132 |
Strand | - |
Start bp | 1380794 |
End bp | 1381984 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 644963312 |
Product | oxidoreductase domain protein |
Protein accession | YP_003120855 |
Protein GI | 256420202 |
COG category | [R] General function prediction only |
COG ID | [COG0673] Predicted dehydrogenases and related proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.741439 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACGTA TTTCCATGTT AGGTTCCGGC TTTATCGGCC GCTTCTATGC AGACTCCTTA CAGGGACAGA GAAGCCGGGA CAAGATTGTC AGCATCTATT CGCGCAGAGA AGAGAGTGCG AAGAAATTTG CAGAAGACTA TAATGTCGCT CACTGGACTA CGGATATGGA AGCATCCATT GCACATCCGG ATGTGAATGT GGTTTGTATT TCCCTTCCTA ATAACCTGCA CGAAGCAGCA GTAGCACTCT GCTGTAAACA CAAGAAAGGC GTCATCTGTA CCAAGCCCCT GGGCCGTAAT GCAGAAGAAG CGAAACGTAT GCTGGAAATG GTAGAAGCTG CCGGTATCTT CAACGGCTAT CTCGAAGACC TGGTATACAC CCCGAAATTC CTGAAAGCAC TGGATAGCGT TAAAAGTGGC GCTTTGGGAC GTATTCTCTG GGCTAAATCC AGGGAAACAC ACCCCGGCCC GCACAGCGAA TGGTTCTGGG ATAAAGAACA GGCAGGTGGT GGCTGTATCC TCGACCTGGG ATGCCATTGC GTAGAGATTG CACGTAGCTT TATCGGAAAA GATATCAAAC CGGTAGAAGT AATGTGCTGG GCAGATACAC AGGTAAAACC CATCGATGCA GAAGACCATG CAATTGGTCT GGTGAAATAT GAAAATGGCG CTATCGGGCA GTTTGAAGTA AGCTGGACAT TCCGCGGCGG ACTTGACCTG CGCGATGAAG TAATGGGTAC TGAAGGTACT ATCTGGTTAA ACAGCTTCCT GCGTACCGGC TTTGATATGT TCACAACCGG TAAAGGCGCT GATTATGTAG CAGAAAAGGC AGAAAGTAAC AGTGGCTGGC TATTCCCGGT AGGTGATGAA CTGAATGAGC TGGGCTATAA CCACATGTTT GCTGATATGT TCAATGCAAT TGAAAGCAAT CAGCCTGCAC GGGAAACATT CTATGACGGA TATGTAGTGA ACGCTGTACT GGATGCTGCT TACCGCAGCG CTGCCAGCAA ACAGTGGGAA CCTGTAAAGC TGGATATTTG GCGTGGTCAG ACTGGCTTAA CGAAACCACA GACACTGGTA GACTACGATG CTGATCATTA CCTGGTGAAA GAAGAGATGA CCCACTTCGG CGCCAAGAAA CTCATCCTGA AAGAGAAGAA AACAGGGCAG ATCATTGAAC GTACGATATA A
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Protein sequence | MQRISMLGSG FIGRFYADSL QGQRSRDKIV SIYSRREESA KKFAEDYNVA HWTTDMEASI AHPDVNVVCI SLPNNLHEAA VALCCKHKKG VICTKPLGRN AEEAKRMLEM VEAAGIFNGY LEDLVYTPKF LKALDSVKSG ALGRILWAKS RETHPGPHSE WFWDKEQAGG GCILDLGCHC VEIARSFIGK DIKPVEVMCW ADTQVKPIDA EDHAIGLVKY ENGAIGQFEV SWTFRGGLDL RDEVMGTEGT IWLNSFLRTG FDMFTTGKGA DYVAEKAESN SGWLFPVGDE LNELGYNHMF ADMFNAIESN QPARETFYDG YVVNAVLDAA YRSAASKQWE PVKLDIWRGQ TGLTKPQTLV DYDADHYLVK EEMTHFGAKK LILKEKKTGQ IIERTI
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